Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 Z93929.1-201ENST00000418200 1475 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 SNORA70.3-201ENST00000365075 132 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 CYCSP17-201ENST00000407870 315 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 GAPDHP57-201ENST00000424400 585 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 RPS10P21-201ENST00000430654 475 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 E2F6P3-201ENST00000441743 743 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 SERPINA7P1-201ENST00000443077 631 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 RPSAP24-201ENST00000461543 873 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 OR10J9P-201ENST00000511932 987 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 RN7SKP98-201ENST00000517070 156 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 SETP17-201ENST00000534163 817 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 PPIAP14-201ENST00000577627 496 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AC087269.2-201ENST00000641764 975 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 EPS15P1-202ENST00000459691 2071 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 RNA5SP474-201ENST00000391234 90 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 AL353133.1-201ENST00000407695 401 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 PAICSP2-201ENST00000429118 1150 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 PFN1P11-201ENST00000445829 389 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 TATDN2P3-201ENST00000452855 3665 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 RN7SKP198-201ENST00000459286 306 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 RPS3AP49-201ENST00000472161 790 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 RN7SL382P-201ENST00000482631 282 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 RPL5P11-201ENST00000498068 893 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 RNA5SP318-201ENST00000516352 92 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 AC131935.1-201ENST00000524621 333 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 SNRPCP6-201ENST00000528310 210 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 RACGAP1P-201ENST00000550663 1879 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 AC004023.1-201ENST00000561473 1744 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 DIMT1P1-201ENST00000603970 763 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 MIR6849-201ENST00000618543 69 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 AC131009.3-201ENST00000621809 287 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 AC025287.2-201ENST00000621911 668 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 AC005839.1-201ENST00000624148 3213 ntBASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms