Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 SNORA11D-201ENST00000408548 128 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 SNORA11E-201ENST00000408778 128 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 NFYAP1-201ENST00000431953 972 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 AL353803.3-201ENST00000444641 335 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 OR52I1-201ENST00000450052 1050 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 RNU7-157P-201ENST00000459600 66 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 AP002371.1-201ENST00000463604 433 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 RPL5P16-201ENST00000471467 790 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 AP000805.1-201ENST00000471604 784 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 PGBD4P1-201ENST00000473644 407 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 EEF1B2P2-201ENST00000519625 676 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 AC079866.1-201ENST00000534985 1220 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 AC016144.1-201ENST00000548175 1087 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 AC111186.1-201ENST00000604684 130 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 AC139792.1-201ENST00000607051 647 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 AC087821.1-201ENST00000623639 567 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 AC011471.4-201ENST00000638271 216 ntBASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.24□□□□□ -1.41
NHLRC1Q6VVB1 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC062029.1-202ENST00000606164 3651 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 RN7SKP148-201ENST00000410179 275 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC091390.2-201ENST00000432573 374 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 MTCO3P17-201ENST00000443775 513 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 RPL34P34-201ENST00000465389 354 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 TUBBP11-201ENST00000472255 252 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC010409.2-201ENST00000505780 478 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 OR5D2P-201ENST00000524390 911 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AP001646.2-201ENST00000528645 1156 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC093524.1-201ENST00000564266 1094 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 SNORA70D-201ENST00000578836 135 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC107993.1-201ENST00000591343 684 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC099777.1-201ENST00000603779 1070 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC007347.2-201ENST00000623044 180 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 AC012629.3-201ENST00000623397 328 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 ZNF658B-201ENST00000602828 3408 ntBASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms