Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL445213.1-201ENST00000412589 747 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC017104.2-201ENST00000417000 321 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AL034379.1-201ENST00000423216 253 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AL512882.1-201ENST00000436086 832 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 CYP2C56P-201ENST00000440076 291 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 MTCYBP14-201ENST00000457471 715 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 CTSLP6-201ENST00000458273 1002 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 RPS7P11-201ENST00000484240 586 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 RPL5P11-201ENST00000498068 893 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 GCSHP1-201ENST00000512554 484 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC111000.1-201ENST00000514545 713 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 NPIPP1-203ENST00000547107 1071 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC092133.1-201ENST00000565828 719 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC105275.2-201ENST00000567907 711 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 MIR3137-201ENST00000577367 75 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 LSM1P2-201ENST00000604911 322 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC122710.3-201ENST00000606566 541 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC080112.3-201ENST00000612552 880 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AL353898.2-201ENST00000623000 255 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AL139384.2-201ENST00000613809 3590 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC005034.3-201ENST00000604845 1747 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AP000547.3-204ENST00000588548 2523 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC004986.1-201ENST00000414855 607 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC096644.3-201ENST00000416788 338 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 GRPEL2P2-201ENST00000421856 670 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 DUTP4-201ENST00000424782 475 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 PHBP4-201ENST00000437447 837 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AL929410.2-201ENST00000451170 189 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 NUCKS1P1-201ENST00000452067 703 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 KIF3AP1-201ENST00000454055 611 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 RN7SL414P-201ENST00000469545 294 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 RN7SL233P-201ENST00000469988 277 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 RN7SL549P-201ENST00000478997 282 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 RN7SL42P-201ENST00000579786 294 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 RN7SL237P-201ENST00000580912 287 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 RN7SL657P-201ENST00000582431 293 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC007136.1-201ENST00000589141 199 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms