Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 FAM30C-201ENST00000561158 410 ntBASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 AC091304.5-201ENST00000568969 158 ntBASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 AC093909.6-201ENST00000624757 775 ntBASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 AC009950.2-201ENST00000636548 183 ntBASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC119674.1-204ENST00000641348 1343 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 SNORA70.3-201ENST00000365075 132 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 MIR541-201ENST00000401360 84 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 OR52U1P-201ENST00000439752 923 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AL354714.5-201ENST00000450131 590 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AL929410.2-201ENST00000451170 189 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC114755.1-201ENST00000453101 868 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 RPS4XP19-201ENST00000460237 736 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 RN7SL561P-201ENST00000488553 281 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC087752.2-201ENST00000521219 281 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC092375.1-201ENST00000550410 637 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AL132640.1-201ENST00000559594 619 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 MIR5682-201ENST00000584864 76 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC245407.2-201ENST00000614199 451 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 OR1N1-202ENST00000619659 939 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AL354718.1-201ENST00000619764 589 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 AC025287.2-201ENST00000621911 668 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ZNF549Q6P9A3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AC061975.7-201ENST00000592016 2692 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AL359195.2-201ENST00000623657 4412 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AL136531.3-201ENST00000624378 3658 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AL589993.1-201ENST00000407450 2524 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 CYP2G2P-201ENST00000594920 1485 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 Z97989.1-201ENST00000531702 2421 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 RN7SKP268-201ENST00000411107 316 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 CRYGGP-201ENST00000443337 145 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms