Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 OR4A13P-201ENST00000529316 942 ntBASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 FO681491.1-202ENST00000623392 737 ntBASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC9.96□□□□□ -0.82
CDC42BPAQ5VT25 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 AC009500.1-201ENST00000420684 583 ntBASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 AC245452.2-201ENST00000435222 392 ntBASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 AC242426.1-201ENST00000435270 960 ntBASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 PPIAP20-201ENST00000449839 135 ntBASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 AL049840.5-201ENST00000602827 552 ntBASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 AL136097.3-201ENST00000611097 505 ntBASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 IGKV2OR2-10-201ENST00000613976 311 ntBASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 AC010333.3-201ENST00000615100 402 ntBASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 AC129915.3-201ENST00000634128 948 ntBASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42BPAQ5VT25 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 AC009135.2-201ENST00000624136 1768 ntBASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 NPL-212ENST00000614468 2376 ntTSL 5 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 AC004386.1-201ENST00000393214 761 ntBASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 AL157702.1-201ENST00000398764 426 ntBASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 RN7SKP281-201ENST00000410472 352 ntBASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 RPS3P2-201ENST00000421346 701 ntBASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 CDK7P1-201ENST00000434574 693 ntBASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 IGHV4-55-201ENST00000520889 368 ntBASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 AC068768.2-201ENST00000602352 343 ntBASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 BUB1P1-201ENST00000603541 607 ntBASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 MRPL57P1-201ENST00000621486 265 ntBASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 PFKM-232ENST00000629846 381 ntTSL 4 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC9.94□□□□□ -0.82
CDC42BPAQ5VT25 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 LPAL2-203ENST00000454031 2498 ntBASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 MED28P4-201ENST00000433137 572 ntBASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 OR9L1P-201ENST00000529493 933 ntBASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42BPAQ5VT25 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms