Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.97□□□□□ -1.13
SHROOM1Q2M3G4 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SHROOM1Q2M3G4 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
SHROOM1Q2M3G4 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHROOM1Q2M3G4 AC009948.5-201ENST00000624360 4406 ntBASIC7.97□□□□□ -1.13
SHROOM1Q2M3G4 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SHROOM1Q2M3G4 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHROOM1Q2M3G4 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.97□□□□□ -1.13
SHROOM1Q2M3G4 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.96□□□□□ -1.13
SHROOM1Q2M3G4 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.96□□□□□ -1.13
SHROOM1Q2M3G4 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SHROOM1Q2M3G4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
SHROOM1Q2M3G4 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SHROOM1Q2M3G4 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
SHROOM1Q2M3G4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SHROOM1Q2M3G4 AL451064.2-201ENST00000623514 1654 ntBASIC7.96□□□□□ -1.13
SHROOM1Q2M3G4 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
SHROOM1Q2M3G4 PPIAP24-201ENST00000328558 471 ntBASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 RN7SKP62-201ENST00000384539 329 ntBASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 RNA5SP474-201ENST00000391234 90 ntBASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 AL590762.1-201ENST00000391782 432 ntBASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 VN1R53P-201ENST00000429536 957 ntBASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 AC021146.11-201ENST00000503319 491 ntBASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 EEF1B2P2-201ENST00000519625 676 ntBASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 OR4A41P-201ENST00000533053 928 ntBASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 AC007255.2-201ENST00000604053 631 ntBASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 TEX41-271ENST00000628213 993 ntTSL 5 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 PSMC1P6-201ENST00000477233 1319 ntBASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 AC006058.1-201ENST00000568686 5067 ntBASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
SHROOM1Q2M3G4 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 CAP1P2-201ENST00000417455 1409 ntBASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AL034399.1-201ENST00000451535 380 ntBASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AC019084.1-201ENST00000457337 432 ntBASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AC091849.1-201ENST00000509920 121 ntBASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AC005363.1-201ENST00000530779 351 ntBASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 OR52K3P-201ENST00000531655 943 ntBASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 ULK4P1-202ENST00000565174 503 ntBASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AC025283.1-201ENST00000572039 734 ntBASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AL589765.6-201ENST00000601909 549 ntBASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AC111152.1-202ENST00000635848 339 ntBASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AC096992.2-201ENST00000609553 1684 ntBASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHROOM1Q2M3G4 AC092646.2-201ENST00000431242 2095 ntBASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms