Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL035410.2-201ENST00000604963 864 ntBASIC4.72□□□□□ -1.65
RPL39P62891 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RPL39P62891 FAM27E3-202ENST00000614611 340 ntBASIC4.72□□□□□ -1.65
RPL39P62891 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC4.72□□□□□ -1.65
RPL39P62891 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 C18orf12-201ENST00000623329 537 ntBASIC4.72□□□□□ -1.65
RPL39P62891 AP000577.1-201ENST00000624366 878 ntBASIC4.72□□□□□ -1.65
RPL39P62891 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC4.72□□□□□ -1.65
RPL39P62891 AC073488.7-201ENST00000633785 778 ntBASIC4.72□□□□□ -1.65
RPL39P62891 EEF1A1P24-201ENST00000451469 1378 ntBASIC4.72□□□□□ -1.65
RPL39P62891 ATP5BP1-201ENST00000411980 1574 ntBASIC4.72□□□□□ -1.65
RPL39P62891 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RPL39P62891 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
RPL39P62891 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC4.72□□□□□ -1.65
RPL39P62891 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 MAPK10-357ENST00000641831 2858 ntBASIC4.72□□□□□ -1.65
RPL39P62891 AL157831.2-201ENST00000564681 3095 ntBASIC4.72□□□□□ -1.65
RPL39P62891 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
RPL39P62891 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC4.72□□□□□ -1.65
RPL39P62891 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.71□□□□□ -1.65
RPL39P62891 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.71□□□□□ -1.65
RPL39P62891 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RPL39P62891 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC4.71□□□□□ -1.65
RPL39P62891 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 HSPD1P8-201ENST00000400121 1658 ntBASIC4.71□□□□□ -1.66
RPL39P62891 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC4.71□□□□□ -1.66
RPL39P62891 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC4.71□□□□□ -1.66
RPL39P62891 HBBP1-201ENST00000433329 439 ntBASIC4.71□□□□□ -1.66
RPL39P62891 AP006193.1-201ENST00000440724 485 ntBASIC4.71□□□□□ -1.66
RPL39P62891 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC4.71□□□□□ -1.66
RPL39P62891 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC4.71□□□□□ -1.66
RPL39P62891 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC4.71□□□□□ -1.66
RPL39P62891 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC4.71□□□□□ -1.66
RPL39P62891 RPS20P23-201ENST00000461683 354 ntBASIC4.71□□□□□ -1.66
RPL39P62891 AC092824.1-201ENST00000483524 576 ntBASIC4.71□□□□□ -1.66
RPL39P62891 AL591122.1-201ENST00000487348 492 ntBASIC4.71□□□□□ -1.66
RPL39P62891 AC107956.2-201ENST00000496042 454 ntBASIC4.71□□□□□ -1.66
RPL39P62891 AC023794.3-204ENST00000510754 236 ntBASIC4.71□□□□□ -1.66
RPL39P62891 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC4.71□□□□□ -1.66
RPL39P62891 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RPL39P62891 AC090115.2-201ENST00000548060 883 ntBASIC4.71□□□□□ -1.66
RPL39P62891 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC4.71□□□□□ -1.66
RPL39P62891 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC4.71□□□□□ -1.66
RPL39P62891 RN7SL155P-201ENST00000581538 263 ntBASIC4.71□□□□□ -1.66
RPL39P62891 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC4.71□□□□□ -1.66
RPL39P62891 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC4.71□□□□□ -1.66
RPL39P62891 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC4.71□□□□□ -1.66
RPL39P62891 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC4.71□□□□□ -1.66
RPL39P62891 RN7SL126P-201ENST00000616400 299 ntBASIC4.71□□□□□ -1.66
RPL39P62891 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC4.71□□□□□ -1.66
RPL39P62891 AC002094.5-201ENST00000623773 629 ntBASIC4.71□□□□□ -1.66
RPL39P62891 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC4.71□□□□□ -1.66
RPL39P62891 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC4.71□□□□□ -1.66
RPL39P62891 AC124944.3-204ENST00000641191 150 ntBASIC4.71□□□□□ -1.66
RPL39P62891 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC4.71□□□□□ -1.66
RPL39P62891 AL731532.1-201ENST00000623972 4236 ntBASIC4.71□□□□□ -1.66
RPL39P62891 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
RPL39P62891 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC4.71□□□□□ -1.66
RPL39P62891 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC4.71□□□□□ -1.66
RPL39P62891 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
RPL39P62891 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
RPL39P62891 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPL39P62891 AP003486.1-201ENST00000525716 3994 ntBASIC4.71□□□□□ -1.66
RPL39P62891 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RPL39P62891 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPL39P62891 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPL39P62891 CASC19-228ENST00000641414 1684 ntBASIC4.7□□□□□ -1.66
RPL39P62891 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RPL39P62891 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RPL39P62891 AC007159.1-201ENST00000566529 4706 ntBASIC4.7□□□□□ -1.66
RPL39P62891 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPL39P62891 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPL39P62891 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RPL39P62891 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC4.7□□□□□ -1.66
RPL39P62891 AC119674.1-213ENST00000641177 1386 ntBASIC4.7□□□□□ -1.66
RPL39P62891 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RPL39P62891 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPL39P62891 HMGB1P39-201ENST00000366304 880 ntBASIC4.7□□□□□ -1.66
RPL39P62891 SNORA35-201ENST00000386104 128 ntBASIC4.7□□□□□ -1.66
RPL39P62891 RPL7-203ENST00000396466 762 ntTSL 3 BASIC4.7□□□□□ -1.66
RPL39P62891 AL359715.1-201ENST00000404330 555 ntBASIC4.7□□□□□ -1.66
RPL39P62891 CYCSP17-201ENST00000407870 315 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms