Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMARCA4P51532 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
SMARCA4P51532 RPL6P30-201ENST00000443382 862 ntBASIC11.75□□□□□ -0.53
SMARCA4P51532 TVP23CP1-201ENST00000450317 639 ntBASIC11.75□□□□□ -0.53
SMARCA4P51532 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC11.75□□□□□ -0.53
SMARCA4P51532 AC023194.2-201ENST00000465398 406 ntBASIC11.75□□□□□ -0.53
SMARCA4P51532 PPIAP19-201ENST00000486414 492 ntBASIC11.75□□□□□ -0.53
SMARCA4P51532 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC11.75□□□□□ -0.53
SMARCA4P51532 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMARCA4P51532 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC11.75□□□□□ -0.53
SMARCA4P51532 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC11.75□□□□□ -0.53
SMARCA4P51532 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMARCA4P51532 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SMARCA4P51532 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SMARCA4P51532 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
SMARCA4P51532 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SMARCA4P51532 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SMARCA4P51532 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SMARCA4P51532 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMARCA4P51532 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC11.75□□□□□ -0.53
SMARCA4P51532 AC022826.1-201ENST00000519383 805 ntBASIC11.75□□□□□ -0.53
SMARCA4P51532 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC11.75□□□□□ -0.53
SMARCA4P51532 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC11.75□□□□□ -0.53
SMARCA4P51532 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC11.75□□□□□ -0.53
SMARCA4P51532 AC092332.1-201ENST00000563684 829 ntBASIC11.75□□□□□ -0.53
SMARCA4P51532 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC11.75□□□□□ -0.53
SMARCA4P51532 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC11.75□□□□□ -0.53
SMARCA4P51532 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC11.75□□□□□ -0.53
SMARCA4P51532 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SMARCA4P51532 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC11.74□□□□□ -0.53
SMARCA4P51532 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
SMARCA4P51532 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC11.74□□□□□ -0.53
SMARCA4P51532 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 PPCS-201ENST00000372556 984 ntTSL 2 BASIC11.74□□□□□ -0.53
SMARCA4P51532 RN7SKP281-201ENST00000410472 352 ntBASIC11.74□□□□□ -0.53
SMARCA4P51532 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC11.74□□□□□ -0.53
SMARCA4P51532 AC245047.5-201ENST00000437312 556 ntBASIC11.74□□□□□ -0.53
SMARCA4P51532 CST12P-201ENST00000457644 362 ntBASIC11.74□□□□□ -0.53
SMARCA4P51532 AL158068.1-201ENST00000506116 616 ntBASIC11.74□□□□□ -0.53
SMARCA4P51532 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC11.74□□□□□ -0.53
SMARCA4P51532 AL591167.1-201ENST00000607321 456 ntBASIC11.74□□□□□ -0.53
SMARCA4P51532 SNORA74.4-201ENST00000607595 199 ntBASIC11.74□□□□□ -0.53
SMARCA4P51532 AC022467.1-201ENST00000614738 749 ntBASIC11.74□□□□□ -0.53
SMARCA4P51532 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SMARCA4P51532 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMARCA4P51532 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC11.73□□□□□ -0.53
SMARCA4P51532 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SMARCA4P51532 AC091544.5-201ENST00000620192 3815 ntBASIC11.73□□□□□ -0.53
SMARCA4P51532 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SMARCA4P51532 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMARCA4P51532 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMARCA4P51532 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
SMARCA4P51532 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMARCA4P51532 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMARCA4P51532 U3.25-201ENST00000391209 220 ntBASIC11.73□□□□□ -0.53
SMARCA4P51532 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC11.73□□□□□ -0.53
SMARCA4P51532 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC11.73□□□□□ -0.53
SMARCA4P51532 BRWD1P3-201ENST00000428816 390 ntBASIC11.73□□□□□ -0.53
SMARCA4P51532 AC051619.2-201ENST00000559063 397 ntBASIC11.73□□□□□ -0.53
SMARCA4P51532 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC11.73□□□□□ -0.53
SMARCA4P51532 AC091768.1-201ENST00000609258 930 ntBASIC11.73□□□□□ -0.53
SMARCA4P51532 AC026951.2-201ENST00000613847 241 ntBASIC11.73□□□□□ -0.53
SMARCA4P51532 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMARCA4P51532 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMARCA4P51532 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SMARCA4P51532 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC11.73□□□□□ -0.53
SMARCA4P51532 AL133243.2-201ENST00000610331 1621 ntBASIC11.73□□□□□ -0.53
SMARCA4P51532 SAGE3P-201ENST00000619800 1635 ntBASIC11.73□□□□□ -0.53
SMARCA4P51532 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMARCA4P51532 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMARCA4P51532 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC11.73□□□□□ -0.53
SMARCA4P51532 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SMARCA4P51532 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SMARCA4P51532 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMARCA4P51532 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC11.73□□□□□ -0.53
SMARCA4P51532 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMARCA4P51532 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
SMARCA4P51532 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMARCA4P51532 USP48-203ENST00000374732 3037 ntTSL 2 BASIC11.72□□□□□ -0.53
SMARCA4P51532 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMARCA4P51532 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC11.72□□□□□ -0.53
SMARCA4P51532 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SMARCA4P51532 AC017035.1-201ENST00000411999 1115 ntBASIC11.72□□□□□ -0.53
SMARCA4P51532 AC002553.3-201ENST00000453002 341 ntBASIC11.72□□□□□ -0.53
SMARCA4P51532 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMARCA4P51532 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC11.72□□□□□ -0.53
SMARCA4P51532 AC073333.2-201ENST00000603589 769 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms