Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL157899.1-201ENST00000604110 936 ntBASIC7.11□□□□□ -1.27
HTTP42858 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.11□□□□□ -1.27
HTTP42858 AC027279.4-201ENST00000624371 2072 ntBASIC7.11□□□□□ -1.27
HTTP42858 AC015871.3-201ENST00000618835 2261 ntBASIC7.11□□□□□ -1.27
HTTP42858 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.11□□□□□ -1.27
HTTP42858 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
HTTP42858 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.1□□□□□ -1.27
HTTP42858 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
HTTP42858 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 SFXN2-201ENST00000369893 6866 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 HMGB1P32-201ENST00000425971 565 ntBASIC7.1□□□□□ -1.27
HTTP42858 SUMO2P3-201ENST00000438311 288 ntBASIC7.1□□□□□ -1.27
HTTP42858 AC007386.1-201ENST00000455212 582 ntBASIC7.1□□□□□ -1.27
HTTP42858 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.1□□□□□ -1.27
HTTP42858 AC004815.1-201ENST00000484185 331 ntBASIC7.1□□□□□ -1.27
HTTP42858 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.1□□□□□ -1.27
HTTP42858 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.1□□□□□ -1.27
HTTP42858 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.1□□□□□ -1.27
HTTP42858 AL137246.2-201ENST00000613439 662 ntBASIC7.1□□□□□ -1.27
HTTP42858 AC120057.5-201ENST00000623840 154 ntBASIC7.1□□□□□ -1.27
HTTP42858 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.1□□□□□ -1.27
HTTP42858 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.1□□□□□ -1.27
HTTP42858 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.1□□□□□ -1.27
HTTP42858 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
HTTP42858 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.1□□□□□ -1.27
HTTP42858 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
HTTP42858 AC122688.4-201ENST00000623279 4394 ntBASIC7.1□□□□□ -1.27
HTTP42858 RNA5SP375-201ENST00000362975 119 ntBASIC7.1□□□□□ -1.27
HTTP42858 RN7SL834P-201ENST00000461450 286 ntBASIC7.1□□□□□ -1.27
HTTP42858 GLRXP3-201ENST00000470810 321 ntBASIC7.1□□□□□ -1.27
HTTP42858 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.1□□□□□ -1.27
HTTP42858 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.1□□□□□ -1.27
HTTP42858 AL035661.1-201ENST00000620459 1144 ntBASIC7.1□□□□□ -1.27
HTTP42858 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.1□□□□□ -1.27
HTTP42858 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
HTTP42858 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
HTTP42858 RN7SKP273-201ENST00000411392 314 ntBASIC7.1□□□□□ -1.27
HTTP42858 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.1□□□□□ -1.27
HTTP42858 AL354794.2-201ENST00000424795 1248 ntBASIC7.1□□□□□ -1.27
HTTP42858 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.1□□□□□ -1.27
HTTP42858 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.1□□□□□ -1.27
HTTP42858 AC022415.1-202ENST00000486612 523 ntBASIC7.1□□□□□ -1.27
HTTP42858 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
HTTP42858 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.1□□□□□ -1.27
HTTP42858 ZNF322P1-201ENST00000568013 1209 ntBASIC7.1□□□□□ -1.27
HTTP42858 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.1□□□□□ -1.27
HTTP42858 N6AMT1-201ENST00000303775 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 AF287957.1-201ENST00000607368 1595 ntBASIC7.09□□□□□ -1.27
HTTP42858 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.09□□□□□ -1.27
HTTP42858 MFSD8-218ENST00000641186 4448 ntBASIC7.09□□□□□ -1.27
HTTP42858 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 ATP8B2-202ENST00000368489 5861 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 AL663061.1-201ENST00000416625 580 ntBASIC7.09□□□□□ -1.27
HTTP42858 BMS1P17-202ENST00000416720 316 ntBASIC7.09□□□□□ -1.27
HTTP42858 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.09□□□□□ -1.27
HTTP42858 RPS23P6-201ENST00000466136 431 ntBASIC7.09□□□□□ -1.27
HTTP42858 RN7SL184P-201ENST00000488308 297 ntBASIC7.09□□□□□ -1.27
HTTP42858 AC139272.1-201ENST00000505516 640 ntBASIC7.09□□□□□ -1.27
HTTP42858 AC131392.1-201ENST00000506490 633 ntBASIC7.09□□□□□ -1.27
HTTP42858 AC016144.1-201ENST00000548175 1087 ntBASIC7.09□□□□□ -1.27
HTTP42858 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.09□□□□□ -1.27
HTTP42858 ELOCP28-201ENST00000590044 317 ntBASIC7.09□□□□□ -1.27
HTTP42858 AL049840.5-201ENST00000602827 552 ntBASIC7.09□□□□□ -1.27
HTTP42858 BUB1P1-201ENST00000603541 607 ntBASIC7.09□□□□□ -1.27
HTTP42858 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.09□□□□□ -1.27
HTTP42858 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.09□□□□□ -1.27
HTTP42858 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 Z97989.1-201ENST00000531702 2421 ntBASIC7.09□□□□□ -1.27
HTTP42858 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
HTTP42858 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC7.09□□□□□ -1.27
HTTP42858 PTGS1-207ENST00000619306 5051 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
HTTP42858 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
HTTP42858 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.09□□□□□ -1.27
HTTP42858 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.09□□□□□ -1.27
HTTP42858 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms