Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC022507.1-201ENST00000548349 1505 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 AL591848.3-201ENST00000570141 2968 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 FTH1P3-201ENST00000394290 584 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 MAPK6PS6-201ENST00000420752 1053 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 MTCO2P34-201ENST00000421994 607 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 RPL5P27-201ENST00000437011 881 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 RPS10P14-201ENST00000440748 502 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 AL136455.1-201ENST00000441083 1240 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 RAB11AP1-201ENST00000442978 646 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC005410.1-202ENST00000460347 485 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 TUBBP11-201ENST00000472255 252 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC092349.1-201ENST00000504903 310 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 SCARNA15.1-201ENST00000516384 125 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC067904.2-201ENST00000517322 1283 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 AP001000.1-201ENST00000526843 742 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 HMGN1P26-201ENST00000558737 303 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC124283.4-201ENST00000581815 456 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 C8orf59P2-201ENST00000603441 271 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC012510.1-201ENST00000607946 759 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 IGKV1OR1-1-201ENST00000613775 347 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC072046.2-201ENST00000618366 268 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 AC006453.3-201ENST00000635891 377 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 DAZL-202ENST00000399444 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 MAPK10-260ENST00000641047 2546 ntBASIC9.11□□□□□ -0.95
ALDH1A1P00352 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC9.11□□□□□ -0.95
ALDH1A1P00352 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALDH1A1P00352 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 GAD1-217ENST00000625689 3700 ntTSL 5 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 EIF3EP2-201ENST00000423042 1814 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 ZNF385B-203ENST00000409692 2109 ntTSL 5 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 CHMP1B2P-201ENST00000399581 597 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 MICG-208ENST00000416822 132 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 SMARCE1P1-201ENST00000417747 1186 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 AC021876.1-201ENST00000425959 359 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 BX119917.1-201ENST00000432517 502 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 AC099344.1-201ENST00000433548 492 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 KCTD9P3-201ENST00000434597 1169 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 NQO1-204ENST00000439109 924 ntTSL 2 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 RPL31P58-201ENST00000469001 379 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 RPS3P7-201ENST00000488662 726 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 RNU6-319P-201ENST00000516025 108 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 HERC2P5-201ENST00000562687 3825 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms