Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AP003175.1-201ENST00000641383 6658 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 LDHAP5-201ENST00000394996 622 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 RPL17P17-201ENST00000419491 557 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 RPL3P11-201ENST00000434028 1146 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 AL022324.2-201ENST00000434827 780 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 PSMD8P1-201ENST00000436275 769 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 RPS4XP17-201ENST00000479057 754 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 ACTG1P15-201ENST00000570019 1063 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 ARGFXP2-201ENST00000579304 949 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 AL137000.1-201ENST00000610528 1244 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 AP005212.3-201ENST00000619964 528 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 MIR6813-201ENST00000621638 56 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 MBD5-221ENST00000637159 902 ntTSL 5 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 AC102941.1-201ENST00000567616 1537 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 CDY7P-201ENST00000429883 1604 ntBASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CLIP2Q9UDT6 AC004023.1-201ENST00000561473 1744 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 AC073342.2-201ENST00000595842 1800 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 AL359263.1-201ENST00000441188 2796 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 RNA5SP172-201ENST00000365061 118 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 NRIR-201ENST00000366140 799 ntTSL 3 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 AC092634.1-201ENST00000366505 199 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 ARSFP1-201ENST00000398758 477 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 RN7SKP91-201ENST00000410852 288 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 CYP4F32P-201ENST00000426492 504 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 MYL6P3-201ENST00000436904 432 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 CHEK2P2-201ENST00000554701 672 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 PPIAP6-201ENST00000557078 499 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 PLEKHA3P1-201ENST00000598554 894 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 AC244100.4-201ENST00000617747 388 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 MRPL57P3-201ENST00000619218 176 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 AC004943.1-203ENST00000624370 1074 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 ATP5BP1-201ENST00000411980 1574 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 AC095038.1-201ENST00000429248 1591 ntBASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.17□□□□□ -1.1
CLIP2Q9UDT6 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 RNU1-24P-201ENST00000364285 165 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 RN7SKP189-201ENST00000365042 330 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms