Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 QRSL1P1-201ENST00000400977 1540 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 LINC01550-202ENST00000502187 2455 ntTSL 2 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 FOXP1-220ENST00000614176 6384 ntAPPRIS ALT1 TSL 2 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AL132640.2-201ENST00000559968 1698 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC012377.1-202ENST00000558675 4811 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC024610.2-205ENST00000584758 1567 ntTSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 ZNF849P-201ENST00000594711 1566 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 MED7-201ENST00000286317 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 DCTN4-202ENST00000446090 1737 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC134508.1-201ENST00000570082 2977 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 C17orf80-205ENST00000535032 2129 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 PDE4D-207ENST00000405755 2294 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 SCNM1-202ENST00000368905 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 C4BPB-202ENST00000367076 1113 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 MIR181C-201ENST00000384881 110 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 Y_RNA.582-201ENST00000391023 95 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 RN7SKP225-201ENST00000410405 352 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AL139421.1-201ENST00000423010 169 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 SEPHS1P1-201ENST00000426891 958 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AL354983.1-201ENST00000434580 906 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC108463.1-201ENST00000450258 347 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 PHBP9-201ENST00000453578 825 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 RPL5P24-201ENST00000463742 885 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 RN7SL741P-201ENST00000482473 289 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC096576.1-201ENST00000489014 359 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AP001646.2-201ENST00000528645 1156 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC090515.3-201ENST00000560431 315 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC093249.3-201ENST00000562444 424 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC008536.2-201ENST00000607284 349 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 AL513479.1-201ENST00000611376 585 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC103564.3-201ENST00000621194 220 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 ATE1-AS1-202ENST00000636460 506 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC008739.5-201ENST00000623035 1938 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 CASK-208ENST00000442742 2800 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 CSF3R-203ENST00000373103 3454 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 GRB10-203ENST00000398810 4785 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 SLC8A1-205ENST00000405901 3139 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 DHX40-201ENST00000251241 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 TTLL5-201ENST00000286650 1595 ntTSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 ZNF90P1-201ENST00000480493 1951 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC002090.1-201ENST00000625000 2138 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 KLHL12-202ENST00000367259 2257 ntTSL 2 BASIC9.28□□□□□ -0.92
LRCH3Q96II8 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 NCOA4P4-201ENST00000513338 1861 ntBASIC9.28□□□□□ -0.92
LRCH3Q96II8 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
LRCH3Q96II8 POU6F2-210ENST00000559001 2403 ntTSL 5 BASIC9.27□□□□□ -0.92
LRCH3Q96II8 ERVV-2-201ENST00000601417 2431 ntAPPRIS P1 TSL 4 BASIC9.27□□□□□ -0.92
LRCH3Q96II8 ASCC1-202ENST00000317168 2002 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
LRCH3Q96II8 SH3GL3-201ENST00000324537 2012 ntTSL 2 BASIC9.27□□□□□ -0.92
LRCH3Q96II8 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
LRCH3Q96II8 BX284613.1-201ENST00000452221 1641 ntBASIC9.27□□□□□ -0.92
LRCH3Q96II8 AL162632.3-201ENST00000566976 1625 ntBASIC9.27□□□□□ -0.92
LRCH3Q96II8 KCNJ15-208ENST00000398938 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
LRCH3Q96II8 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC9.27□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms