Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AL451063.1-201ENST00000450164 1133 ntBASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AP000805.1-201ENST00000471604 784 ntBASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AL591122.1-201ENST00000487348 492 ntBASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AP003080.1-202ENST00000526526 915 ntBASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AC090971.3-201ENST00000557871 1041 ntBASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 SNORA70D-201ENST00000578836 135 ntBASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 CLCA3P-203ENST00000490028 2781 ntBASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AP002800.1-201ENST00000624982 2225 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 MAPK10-379ENST00000642013 1385 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 RNA5SP427-201ENST00000365323 119 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AC090114.1-201ENST00000393266 448 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 MIR541-201ENST00000401360 84 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 VDAC2P3-201ENST00000430995 828 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AC010878.1-201ENST00000456500 1047 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 RPLP0P1-201ENST00000457002 361 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 MYL6P4-201ENST00000477911 453 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AC018475.1-201ENST00000478358 465 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AC063943.2-201ENST00000495697 534 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 NACAP6-201ENST00000509572 622 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 OR5M4P-201ENST00000529436 925 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AC131009.3-201ENST00000621809 287 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 OR5AU1-204ENST00000641822 1197 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AL662795.2-201ENST00000624252 3706 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AC034229.2-201ENST00000566945 2508 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 AC119674.1-204ENST00000641348 1343 ntBASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC50Q8IVM0 OLMALINC-203ENST00000641087 3779 ntBASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 SLC2A3P2-201ENST00000331747 1480 ntBASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 OR11H13P-201ENST00000359695 979 ntBASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 RNU4-81P-201ENST00000363561 144 ntBASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 VDAC1P10-201ENST00000416715 891 ntBASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 ATP5LP4-201ENST00000434169 307 ntBASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC50Q8IVM0 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms