Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC4.73□□□□□ -1.65
RPL39P62891 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC4.73□□□□□ -1.65
RPL39P62891 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RPL39P62891 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RPL39P62891 OR11H13P-201ENST00000359695 979 ntBASIC4.73□□□□□ -1.65
RPL39P62891 RNU1-21P-201ENST00000363327 163 ntBASIC4.73□□□□□ -1.65
RPL39P62891 RN7SKP118-201ENST00000364331 330 ntBASIC4.73□□□□□ -1.65
RPL39P62891 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
RPL39P62891 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
RPL39P62891 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC4.73□□□□□ -1.65
RPL39P62891 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC4.73□□□□□ -1.65
RPL39P62891 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 ALDH7A1P4-201ENST00000412255 178 ntBASIC4.73□□□□□ -1.65
RPL39P62891 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC4.73□□□□□ -1.65
RPL39P62891 EIF4A1P13-201ENST00000415667 230 ntBASIC4.73□□□□□ -1.65
RPL39P62891 AC002367.1-201ENST00000416765 405 ntBASIC4.73□□□□□ -1.65
RPL39P62891 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC4.73□□□□□ -1.65
RPL39P62891 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC4.73□□□□□ -1.65
RPL39P62891 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC4.73□□□□□ -1.65
RPL39P62891 RPSAP62-201ENST00000432596 833 ntBASIC4.73□□□□□ -1.65
RPL39P62891 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RPL39P62891 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC4.73□□□□□ -1.65
RPL39P62891 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 RN7SL508P-201ENST00000464472 303 ntBASIC4.73□□□□□ -1.65
RPL39P62891 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 RN7SL379P-201ENST00000479912 293 ntBASIC4.73□□□□□ -1.65
RPL39P62891 RN7SL338P-201ENST00000481467 293 ntBASIC4.73□□□□□ -1.65
RPL39P62891 GGTA1P-204ENST00000488429 1104 ntBASIC4.73□□□□□ -1.65
RPL39P62891 HNRNPA1P17-201ENST00000496620 924 ntBASIC4.73□□□□□ -1.65
RPL39P62891 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC4.73□□□□□ -1.65
RPL39P62891 RNA5SP422-201ENST00000516778 111 ntBASIC4.73□□□□□ -1.65
RPL39P62891 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC4.73□□□□□ -1.65
RPL39P62891 AP003499.1-201ENST00000527217 574 ntBASIC4.73□□□□□ -1.65
RPL39P62891 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC4.73□□□□□ -1.65
RPL39P62891 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC4.73□□□□□ -1.65
RPL39P62891 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC4.73□□□□□ -1.65
RPL39P62891 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC4.73□□□□□ -1.65
RPL39P62891 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC4.73□□□□□ -1.65
RPL39P62891 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC4.73□□□□□ -1.65
RPL39P62891 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC4.73□□□□□ -1.65
RPL39P62891 FAM74A6-203ENST00000615956 481 ntBASIC4.73□□□□□ -1.65
RPL39P62891 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC4.73□□□□□ -1.65
RPL39P62891 AP003789.1-201ENST00000617737 605 ntBASIC4.73□□□□□ -1.65
RPL39P62891 AC005393.1-201ENST00000617916 584 ntBASIC4.73□□□□□ -1.65
RPL39P62891 TCL6_3.1-201ENST00000619064 137 ntBASIC4.73□□□□□ -1.65
RPL39P62891 AC012254.5-201ENST00000623573 478 ntBASIC4.73□□□□□ -1.65
RPL39P62891 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC4.73□□□□□ -1.65
RPL39P62891 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 MTCO1P25-201ENST00000414449 1799 ntBASIC4.73□□□□□ -1.65
RPL39P62891 AC005332.9-201ENST00000620266 2921 ntBASIC4.73□□□□□ -1.65
RPL39P62891 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC4.72□□□□□ -1.65
RPL39P62891 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 IMMTP1-201ENST00000435590 2219 ntBASIC4.72□□□□□ -1.65
RPL39P62891 Z97989.1-201ENST00000531702 2421 ntBASIC4.72□□□□□ -1.65
RPL39P62891 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RPL39P62891 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 RNA5SP188-201ENST00000362916 129 ntBASIC4.72□□□□□ -1.65
RPL39P62891 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC4.72□□□□□ -1.65
RPL39P62891 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RPL39P62891 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC4.72□□□□□ -1.65
RPL39P62891 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC4.72□□□□□ -1.65
RPL39P62891 MED15P9-201ENST00000424716 533 ntBASIC4.72□□□□□ -1.65
RPL39P62891 CHCHD3P1-201ENST00000425516 676 ntBASIC4.72□□□□□ -1.65
RPL39P62891 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC4.72□□□□□ -1.65
RPL39P62891 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPL39P62891 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC4.72□□□□□ -1.65
RPL39P62891 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC4.72□□□□□ -1.65
RPL39P62891 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC4.72□□□□□ -1.65
RPL39P62891 TCEAL4P1-201ENST00000453620 588 ntBASIC4.72□□□□□ -1.65
RPL39P62891 MYL6P4-201ENST00000477911 453 ntBASIC4.72□□□□□ -1.65
RPL39P62891 NPM1P27-201ENST00000502784 830 ntBASIC4.72□□□□□ -1.65
RPL39P62891 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC4.72□□□□□ -1.65
RPL39P62891 CHCHD2P7-201ENST00000508008 452 ntBASIC4.72□□□□□ -1.65
RPL39P62891 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC4.72□□□□□ -1.65
RPL39P62891 OR52K3P-201ENST00000531655 943 ntBASIC4.72□□□□□ -1.65
RPL39P62891 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC4.72□□□□□ -1.65
RPL39P62891 AL031846.1-201ENST00000560933 314 ntBASIC4.72□□□□□ -1.65
RPL39P62891 AC133569.1-201ENST00000564327 373 ntBASIC4.72□□□□□ -1.65
RPL39P62891 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC4.72□□□□□ -1.65
RPL39P62891 AC020914.7-201ENST00000594477 545 ntBASIC4.72□□□□□ -1.65
RPL39P62891 AC007255.2-201ENST00000604053 631 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms