Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.17□□□□□ -1.1
CNGA1P29973 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.17□□□□□ -1.1
CNGA1P29973 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.17□□□□□ -1.1
CNGA1P29973 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC8.17□□□□□ -1.1
CNGA1P29973 AL034417.4-202ENST00000642135 2236 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CNGA1P29973 ALDH7A1P4-201ENST00000412255 178 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 VDAC1P10-201ENST00000416715 891 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 NDUFA5P1-201ENST00000433858 341 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 AC245047.5-201ENST00000437312 556 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 AL031681.1-201ENST00000443304 400 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC8.17□□□□□ -1.1
CNGA1P29973 AL136981.1-203ENST00000451452 3844 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC8.17□□□□□ -1.1
CNGA1P29973 AC098818.1-201ENST00000478593 252 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 RPL37AP8-201ENST00000494116 276 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 RN7SL775P-201ENST00000498361 336 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC8.17□□□□□ -1.1
CNGA1P29973 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 DCAF13P2-201ENST00000514188 555 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 MINOS1P4-201ENST00000515470 318 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC8.17□□□□□ -1.1
CNGA1P29973 AC116917.1-201ENST00000520558 305 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 AC021820.1-201ENST00000525564 808 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 AC023310.2-201ENST00000553844 547 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CNGA1P29973 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC8.17□□□□□ -1.1
CNGA1P29973 ADAD1P2-201ENST00000588476 646 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC8.17□□□□□ -1.1
CNGA1P29973 AC092474.3-201ENST00000603022 568 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 AC007423.1-201ENST00000605009 627 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 AC015802.5-201ENST00000607478 399 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC8.17□□□□□ -1.1
CNGA1P29973 AC008626.2-201ENST00000624425 248 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.17□□□□□ -1.1
CNGA1P29973 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.17□□□□□ -1.1
CNGA1P29973 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CNGA1P29973 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.17□□□□□ -1.1
CNGA1P29973 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.17□□□□□ -1.1
CNGA1P29973 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.17□□□□□ -1.1
CNGA1P29973 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.17□□□□□ -1.1
CNGA1P29973 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.17□□□□□ -1.1
CNGA1P29973 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.17□□□□□ -1.1
CNGA1P29973 HSPA8P11-201ENST00000508840 1898 ntBASIC8.17□□□□□ -1.1
CNGA1P29973 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.17□□□□□ -1.1
CNGA1P29973 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.17□□□□□ -1.1
CNGA1P29973 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CNGA1P29973 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC8.17□□□□□ -1.1
CNGA1P29973 AC004014.2-201ENST00000623718 5122 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.16□□□□□ -1.1
CNGA1P29973 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8.16□□□□□ -1.1
CNGA1P29973 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.16□□□□□ -1.1
CNGA1P29973 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CNGA1P29973 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.16□□□□□ -1.1
CNGA1P29973 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.16□□□□□ -1.1
CNGA1P29973 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.16□□□□□ -1.1
CNGA1P29973 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CNGA1P29973 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 RN7SKP187-201ENST00000365536 330 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.16□□□□□ -1.1
CNGA1P29973 CXADRP1-201ENST00000398098 1095 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.16□□□□□ -1.1
CNGA1P29973 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CNGA1P29973 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.16□□□□□ -1.1
CNGA1P29973 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 AC007064.3-201ENST00000422608 359 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 EIF2S2P3-201ENST00000428356 999 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC8.16□□□□□ -1.1
CNGA1P29973 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.16□□□□□ -1.1
CNGA1P29973 RHEBP1-201ENST00000448647 556 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 AL358876.1-201ENST00000453364 1075 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 AC090589.1-201ENST00000473109 362 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC8.16□□□□□ -1.1
CNGA1P29973 RPS7P11-201ENST00000484240 586 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms