Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 MAPK10-319ENST00000641459 2542 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 RN7SKP208-201ENST00000365474 361 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 SNORA35-201ENST00000386104 128 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 UBE2V1P11-201ENST00000411559 285 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AC017035.1-201ENST00000411999 1115 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 HMGB1P49-201ENST00000418882 569 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AC008173.1-201ENST00000418901 264 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 RPL34P27-201ENST00000428810 349 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 CHCHD4P5-201ENST00000436684 427 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 VN1R110P-201ENST00000438988 971 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AC004022.1-201ENST00000447766 1066 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 CREM-220ENST00000463314 964 ntTSL 2 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AC021087.2-201ENST00000504656 1203 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 RN7SKP14-201ENST00000516000 329 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AL136088.1-201ENST00000531002 541 ntTSL 4 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 ZNF321P-202ENST00000550843 495 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AC093063.1-201ENST00000599317 363 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AL139344.1-201ENST00000605228 195 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 OR5AU1-204ENST00000641822 1197 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 MFSD8-243ENST00000641695 1455 ntBASIC7.78□□□□□ -1.16
PHC3Q8NDX5 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PHC3Q8NDX5 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.16
PHC3Q8NDX5 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
PHC3Q8NDX5 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 AC133552.3-201ENST00000572236 1869 ntBASIC7.77□□□□□ -1.17
PHC3Q8NDX5 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 AC017079.1-201ENST00000333650 415 ntBASIC7.77□□□□□ -1.17
PHC3Q8NDX5 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 SNORA71D-201ENST00000363484 134 ntBASIC7.77□□□□□ -1.17
PHC3Q8NDX5 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 RNU6-796P-201ENST00000391086 107 ntBASIC7.77□□□□□ -1.17
PHC3Q8NDX5 RN7SKP182-201ENST00000410772 298 ntBASIC7.77□□□□□ -1.17
PHC3Q8NDX5 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 AC114402.2-201ENST00000432760 643 ntBASIC7.77□□□□□ -1.17
PHC3Q8NDX5 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 RBM22P5-201ENST00000449536 1277 ntBASIC7.77□□□□□ -1.17
PHC3Q8NDX5 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 LRRC6P1-201ENST00000532188 885 ntBASIC7.77□□□□□ -1.17
PHC3Q8NDX5 AP000916.1-201ENST00000533869 835 ntBASIC7.77□□□□□ -1.17
PHC3Q8NDX5 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.77□□□□□ -1.17
PHC3Q8NDX5 SRMP2-201ENST00000553832 916 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms