Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 RNU1-122P-201ENST00000365538 156 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 LST1-211ENST00000376110 433 ntTSL 3 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 PRELID1P2-201ENST00000407805 396 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AL596268.1-201ENST00000427910 1048 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AF274573.1-201ENST00000430535 494 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC105052.2-201ENST00000434317 794 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC244505.2-201ENST00000435089 759 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC005040.1-201ENST00000437783 482 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC015820.1-201ENST00000473882 321 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 RN7SL153P-201ENST00000486501 292 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC008040.4-201ENST00000494834 768 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC093720.1-201ENST00000505681 714 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC134698.1-201ENST00000511619 643 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC021451.1-201ENST00000523498 1129 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 C1DP5-201ENST00000525775 383 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 OR7E10P-201ENST00000526420 991 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 UBE2CP4-201ENST00000561405 535 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC233266.2-201ENST00000567067 528 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 RN7SL835P-201ENST00000579920 262 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AP006587.6-201ENST00000582128 1091 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC146944.4-201ENST00000602697 718 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 SNORA43.5-201ENST00000631270 138 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC233280.20-201ENST00000637412 416 ntBASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM48Q8IWZ4 AC138627.1-203ENST00000641872 1680 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 AL512662.1-201ENST00000624850 2251 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 SAMMSON-203ENST00000641005 2168 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 SNORD51.1-201ENST00000365405 77 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 RNA5SP238-201ENST00000365464 120 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 ARMCX7P-201ENST00000372828 562 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 SSX6-201ENST00000376932 562 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 MIR575-201ENST00000385013 94 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 RNA5SP231-201ENST00000410496 138 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 RN7SKP30-201ENST00000411373 334 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 OR2X1P-201ENST00000421144 687 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 VDAC1P2-201ENST00000423609 850 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 FBP2P1-202ENST00000424473 530 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 SS18L2P1-201ENST00000445923 213 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 AC069277.2-201ENST00000454211 432 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 PTMAP1-205ENST00000455552 325 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 RN7SL104P-201ENST00000498686 293 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 MTCYBP35-201ENST00000503630 1137 ntBASIC7.25□□□□□ -1.25
TRIM48Q8IWZ4 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms