Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MOB1AP2-201ENST00000446060 614 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 TUBBP11-201ENST00000472255 252 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 AC105918.1-201ENST00000474399 838 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 NPM1P17-201ENST00000479221 602 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 AF305872.1-201ENST00000485217 471 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 AL079303.1-201ENST00000486611 463 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.6□□□□□ -1.35
NKX6-1P78426 MRPS5P3-201ENST00000515577 166 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 AC016550.3-201ENST00000515706 767 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 HMGB1P46-201ENST00000520062 610 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.6□□□□□ -1.35
NKX6-1P78426 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC6.6□□□□□ -1.35
NKX6-1P78426 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC044860.3-201ENST00000559957 368 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC005242.1-201ENST00000585658 438 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 AL589765.5-201ENST00000596133 515 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 AC016629.2-201ENST00000597341 199 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC015849.2-201ENST00000605738 409 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC025016.1-201ENST00000616746 682 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC6.6□□□□□ -1.35
NKX6-1P78426 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC117503.3-201ENST00000623811 601 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 AC007683.2-201ENST00000624681 714 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.6□□□□□ -1.35
NKX6-1P78426 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC6.6□□□□□ -1.35
NKX6-1P78426 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 AC107980.1-201ENST00000558671 3355 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.6□□□□□ -1.35
NKX6-1P78426 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NKX6-1P78426 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NKX6-1P78426 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.6□□□□□ -1.35
NKX6-1P78426 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.59□□□□□ -1.35
NKX6-1P78426 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.59□□□□□ -1.35
NKX6-1P78426 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC6.59□□□□□ -1.35
NKX6-1P78426 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NKX6-1P78426 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC6.59□□□□□ -1.35
NKX6-1P78426 BRAFP1-201ENST00000445336 2703 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
NKX6-1P78426 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NKX6-1P78426 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.59□□□□□ -1.35
NKX6-1P78426 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 RN7SKP207-201ENST00000411204 303 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC6.59□□□□□ -1.35
NKX6-1P78426 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.59□□□□□ -1.35
NKX6-1P78426 MTCYBP32-201ENST00000427945 1084 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 E2F6P1-201ENST00000428850 745 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 MRPL50P1-201ENST00000431951 384 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 PTP4A1P3-201ENST00000433661 420 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 AC013403.1-201ENST00000436954 263 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 PIP5K1P2-201ENST00000437005 1120 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 RPS10P14-201ENST00000440748 502 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.59□□□□□ -1.35
NKX6-1P78426 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.59□□□□□ -1.35
NKX6-1P78426 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.59□□□□□ -1.35
NKX6-1P78426 AC022730.1-201ENST00000473114 568 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.59□□□□□ -1.35
NKX6-1P78426 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.59□□□□□ -1.35
NKX6-1P78426 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 RN7SKP105-201ENST00000517192 314 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC6.59□□□□□ -1.35
NKX6-1P78426 AC021820.1-201ENST00000525564 808 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.59□□□□□ -1.35
NKX6-1P78426 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NKX6-1P78426 COX4I1P1-201ENST00000554239 509 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 DNM1P31-201ENST00000564149 696 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NKX6-1P78426 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.59□□□□□ -1.35
NKX6-1P78426 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 SIGLEC31P-201ENST00000594237 551 ntBASIC6.59□□□□□ -1.35
NKX6-1P78426 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NKX6-1P78426 AC245884.10-201ENST00000597355 337 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms