Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AC010329.1-201ENST00000593903 8328 ntBASIC6.43□□□□□ -1.38
SLC1A3P43003 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A3P43003 PABPC1P8-201ENST00000452851 2086 ntBASIC6.43□□□□□ -1.38
SLC1A3P43003 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A3P43003 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A3P43003 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A3P43003 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A3P43003 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.43□□□□□ -1.38
SLC1A3P43003 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A3P43003 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.43□□□□□ -1.38
SLC1A3P43003 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.42□□□□□ -1.38
SLC1A3P43003 AC125232.1-201ENST00000452554 1408 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 CCAT2-201ENST00000630920 1752 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.42□□□□□ -1.38
SLC1A3P43003 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC1A3P43003 AL157698.1-201ENST00000415190 1011 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 EIF4A1P13-201ENST00000415667 230 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 VDAC1P10-201ENST00000416715 891 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.42□□□□□ -1.38
SLC1A3P43003 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 DBIL5P2-201ENST00000443827 253 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 RPLP0P1-201ENST00000457002 361 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 AC091982.1-202ENST00000473923 343 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.42□□□□□ -1.38
SLC1A3P43003 TECRP2-201ENST00000503270 928 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 MTND6P8-201ENST00000503471 522 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 NACAP6-201ENST00000509572 622 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 SCARNA6-201ENST00000515982 265 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SLC1A3P43003 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.42□□□□□ -1.38
SLC1A3P43003 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.42□□□□□ -1.38
SLC1A3P43003 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.42□□□□□ -1.38
SLC1A3P43003 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 AL132640.2-202ENST00000559732 614 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.42□□□□□ -1.38
SLC1A3P43003 AC091304.5-201ENST00000568969 158 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 AC005070.2-201ENST00000604391 260 ntBASIC6.42□□□□□ -1.38
SLC1A3P43003 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC1A3P43003 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SLC1A3P43003 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SLC1A3P43003 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC1A3P43003 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.41□□□□□ -1.38
SLC1A3P43003 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC1A3P43003 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC1A3P43003 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SLC1A3P43003 CDY10P-201ENST00000452415 1567 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.41□□□□□ -1.38
SLC1A3P43003 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SLC1A3P43003 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SLC1A3P43003 AC083806.2-201ENST00000617795 2685 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 AL596244.1-201ENST00000567068 3779 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC1A3P43003 U3.14-201ENST00000365363 227 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
SLC1A3P43003 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SLC1A3P43003 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SLC1A3P43003 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC1A3P43003 PHB2P1-201ENST00000434943 890 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 ANXA2P2-201ENST00000435128 1020 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 AL604028.2-201ENST00000437848 788 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.41□□□□□ -1.38
SLC1A3P43003 OR51P1P-201ENST00000447547 942 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.41□□□□□ -1.38
SLC1A3P43003 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.41□□□□□ -1.38
SLC1A3P43003 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.41□□□□□ -1.38
SLC1A3P43003 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.41□□□□□ -1.38
SLC1A3P43003 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.41□□□□□ -1.38
SLC1A3P43003 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.41□□□□□ -1.38
SLC1A3P43003 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.41□□□□□ -1.38
SLC1A3P43003 FXNP1-201ENST00000555153 337 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 AC018558.5-201ENST00000565840 952 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 MIR1273F-201ENST00000580581 99 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 EXOSC3P2-201ENST00000594464 497 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC1A3P43003 AL035417.2-201ENST00000603887 796 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 AC111186.1-201ENST00000604684 130 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 CYCSP1-201ENST00000604815 315 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC1A3P43003 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC1A3P43003 AC063952.1-203ENST00000634410 658 ntBASIC6.41□□□□□ -1.38
SLC1A3P43003 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC1A3P43003 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
SLC1A3P43003 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC1A3P43003 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC1A3P43003 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SLC1A3P43003 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC1A3P43003 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC1A3P43003 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms