Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AL512662.1-201ENST00000624850 2251 ntBASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.99□□□□□ -1.13
SHKBP1Q8TBC3 AC130464.1-201ENST00000416201 1500 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 MIR27A-201ENST00000385073 78 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 HMGB1P13-201ENST00000406019 642 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 TRGV6-201ENST00000417928 299 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 SNX18P3-201ENST00000424993 835 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 SNRPEP5-201ENST00000425442 278 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC013262.1-201ENST00000426710 252 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AL353754.1-201ENST00000440219 340 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC239800.1-201ENST00000442049 719 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC073387.1-201ENST00000453261 709 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC093827.1-201ENST00000480094 861 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 FAM177A1P1-201ENST00000503598 473 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC016559.1-201ENST00000511420 199 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 OR10J9P-201ENST00000511932 987 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 RNU6-1102P-201ENST00000516149 96 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 MRPS36P3-201ENST00000519284 130 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC084824.1-201ENST00000550917 1005 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC024909.2-201ENST00000553035 286 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC009094.1-201ENST00000564443 426 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC068135.2-201ENST00000569293 1028 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AL512430.4-201ENST00000603085 613 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AL353807.4-201ENST00000604995 257 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC116165.2-201ENST00000616705 206 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC124319.3-201ENST00000616832 526 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC021422.1-201ENST00000621212 473 ntBASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
SHKBP1Q8TBC3 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 AC087045.3-201ENST00000623046 2468 ntBASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 RNU6-1320P-201ENST00000390838 107 ntBASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 RNU6-1269P-201ENST00000391139 107 ntBASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 GAPDHP15-201ENST00000398586 975 ntBASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 U3.31-201ENST00000408113 216 ntBASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHKBP1Q8TBC3 BCRP8-201ENST00000412037 255 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms