Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 NF1P7-201ENST00000612076 1530 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AL021331.1-201ENST00000402817 582 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 RNU2-16P-201ENST00000410712 136 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC092638.1-201ENST00000411966 1275 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 EIF1P1-201ENST00000421436 341 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 CFL1P7-201ENST00000424759 486 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 KIF9-203ENST00000425452 640 ntTSL 3 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC068137.1-201ENST00000429272 584 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 RPS28P8-201ENST00000435020 208 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 FAR2P3-205ENST00000447059 604 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 SETP6-201ENST00000479329 568 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC026787.1-201ENST00000504182 420 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 FGB-207ENST00000509493 1164 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 IMPA1P1-202ENST00000522318 332 ntTSL 2 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 PGAM1P8-201ENST00000526979 453 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AP001317.1-201ENST00000531194 960 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AL139174.1-201ENST00000531489 886 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AP005597.3-201ENST00000532369 799 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 PRR13P2-201ENST00000533804 406 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AL109628.2-201ENST00000554037 201 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 LINC02132-201ENST00000598933 750 ntTSL 2 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC026150.3-201ENST00000602595 499 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC004067.1-201ENST00000608733 700 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 MIR6751-201ENST00000610479 63 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 RBM22P4-201ENST00000613117 1240 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC072046.2-201ENST00000618366 268 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC004009.2-201ENST00000623016 728 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 NR1I3-204ENST00000367982 1322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 BMS1P1-201ENST00000374336 1332 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AL157700.1-201ENST00000561973 1432 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 AC010533.1-201ENST00000624875 2105 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 CASC19-238ENST00000641523 1558 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 CARF-216ENST00000444724 2854 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
FOXR1Q6PIV2 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
FOXR1Q6PIV2 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
FOXR1Q6PIV2 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC8.43□□□□□ -1.06
FOXR1Q6PIV2 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
FOXR1Q6PIV2 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.43□□□□□ -1.06
FOXR1Q6PIV2 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
FOXR1Q6PIV2 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms