Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.49□□□□□ -1.21
UBE3AQ05086 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
UBE3AQ05086 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
UBE3AQ05086 AC007998.4-201ENST00000612496 2533 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
UBE3AQ05086 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
UBE3AQ05086 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
UBE3AQ05086 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
UBE3AQ05086 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.48□□□□□ -1.21
UBE3AQ05086 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
UBE3AQ05086 RNU6-1017P-201ENST00000363613 106 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 SNORA70G-201ENST00000383923 142 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC7.48□□□□□ -1.21
UBE3AQ05086 LARP1P1-201ENST00000407692 292 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 GAPDHP51-201ENST00000426454 1000 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
UBE3AQ05086 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
UBE3AQ05086 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.48□□□□□ -1.21
UBE3AQ05086 AC007919.2-201ENST00000444110 511 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 RPL7L1P11-201ENST00000446092 721 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
UBE3AQ05086 AL121578.2-201ENST00000448797 447 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.48□□□□□ -1.21
UBE3AQ05086 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.48□□□□□ -1.21
UBE3AQ05086 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.48□□□□□ -1.21
UBE3AQ05086 AC122718.2-201ENST00000505325 591 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
UBE3AQ05086 MTCYBP44-201ENST00000514835 823 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.48□□□□□ -1.21
UBE3AQ05086 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.48□□□□□ -1.21
UBE3AQ05086 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC7.48□□□□□ -1.21
UBE3AQ05086 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.48□□□□□ -1.21
UBE3AQ05086 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
UBE3AQ05086 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC7.48□□□□□ -1.21
UBE3AQ05086 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.48□□□□□ -1.21
UBE3AQ05086 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.48□□□□□ -1.21
UBE3AQ05086 MIR4732-201ENST00000581873 76 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.48□□□□□ -1.21
UBE3AQ05086 AC127071.1-201ENST00000624997 712 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.48□□□□□ -1.21
UBE3AQ05086 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.48□□□□□ -1.21
UBE3AQ05086 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
UBE3AQ05086 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.48□□□□□ -1.21
UBE3AQ05086 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
UBE3AQ05086 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
UBE3AQ05086 BRD7P1-201ENST00000557705 1915 ntBASIC7.48□□□□□ -1.21
UBE3AQ05086 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
UBE3AQ05086 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.48□□□□□ -1.21
UBE3AQ05086 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
UBE3AQ05086 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.48□□□□□ -1.21
UBE3AQ05086 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.48□□□□□ -1.21
UBE3AQ05086 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
UBE3AQ05086 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
UBE3AQ05086 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.48□□□□□ -1.21
UBE3AQ05086 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
UBE3AQ05086 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
UBE3AQ05086 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.47□□□□□ -1.21
UBE3AQ05086 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.47□□□□□ -1.21
UBE3AQ05086 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
UBE3AQ05086 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.47□□□□□ -1.21
UBE3AQ05086 AC145138.1-201ENST00000512908 2851 ntBASIC7.47□□□□□ -1.21
UBE3AQ05086 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.47□□□□□ -1.21
UBE3AQ05086 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
UBE3AQ05086 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
UBE3AQ05086 FANCD2P2-201ENST00000437591 1400 ntBASIC7.47□□□□□ -1.21
UBE3AQ05086 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
UBE3AQ05086 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
UBE3AQ05086 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.47□□□□□ -1.21
UBE3AQ05086 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
UBE3AQ05086 OR51A10P-201ENST00000307165 937 ntBASIC7.47□□□□□ -1.21
UBE3AQ05086 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
UBE3AQ05086 SNORA7A-201ENST00000384765 139 ntBASIC7.47□□□□□ -1.21
UBE3AQ05086 FDPSP5-201ENST00000399474 1057 ntBASIC7.47□□□□□ -1.21
UBE3AQ05086 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.47□□□□□ -1.21
UBE3AQ05086 AC244033.1-201ENST00000426826 870 ntBASIC7.47□□□□□ -1.21
UBE3AQ05086 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
UBE3AQ05086 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.47□□□□□ -1.21
UBE3AQ05086 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.47□□□□□ -1.21
UBE3AQ05086 AC118758.1-202ENST00000454719 225 ntBASIC7.47□□□□□ -1.21
UBE3AQ05086 CTSLP6-201ENST00000458273 1002 ntBASIC7.47□□□□□ -1.21
UBE3AQ05086 RPL5P16-201ENST00000471467 790 ntBASIC7.47□□□□□ -1.21
UBE3AQ05086 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
UBE3AQ05086 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
UBE3AQ05086 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.47□□□□□ -1.21
UBE3AQ05086 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.47□□□□□ -1.21
UBE3AQ05086 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.47□□□□□ -1.21
UBE3AQ05086 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.47□□□□□ -1.21
UBE3AQ05086 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.47□□□□□ -1.21
UBE3AQ05086 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.47□□□□□ -1.21
UBE3AQ05086 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.47□□□□□ -1.21
UBE3AQ05086 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
UBE3AQ05086 PPIAP6-201ENST00000557078 499 ntBASIC7.47□□□□□ -1.21
UBE3AQ05086 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.47□□□□□ -1.21
UBE3AQ05086 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.47□□□□□ -1.21
UBE3AQ05086 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.47□□□□□ -1.21
UBE3AQ05086 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.47□□□□□ -1.21
UBE3AQ05086 AC015849.6-201ENST00000605454 474 ntBASIC7.47□□□□□ -1.21
UBE3AQ05086 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.47□□□□□ -1.21
UBE3AQ05086 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms