Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 PRNCR1-201ENST00000635449 12727 ntBASIC7.39□□□□□ -1.23
NEK3P51956 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
NEK3P51956 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.39□□□□□ -1.23
NEK3P51956 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.39□□□□□ -1.23
NEK3P51956 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.38□□□□□ -1.23
NEK3P51956 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.38□□□□□ -1.23
NEK3P51956 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
NEK3P51956 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.38□□□□□ -1.23
NEK3P51956 AL035563.1-201ENST00000609087 1539 ntBASIC7.38□□□□□ -1.23
NEK3P51956 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.38□□□□□ -1.23
NEK3P51956 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.38□□□□□ -1.23
NEK3P51956 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
NEK3P51956 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.38□□□□□ -1.23
NEK3P51956 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.38□□□□□ -1.23
NEK3P51956 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.38□□□□□ -1.23
NEK3P51956 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
NEK3P51956 RNU6-386P-201ENST00000362650 107 ntBASIC7.38□□□□□ -1.23
NEK3P51956 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.38□□□□□ -1.23
NEK3P51956 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.38□□□□□ -1.23
NEK3P51956 MTND1P10-201ENST00000426108 832 ntBASIC7.38□□□□□ -1.23
NEK3P51956 AC092646.1-201ENST00000427142 901 ntBASIC7.38□□□□□ -1.23
NEK3P51956 MTCO1P57-201ENST00000432182 261 ntBASIC7.38□□□□□ -1.23
NEK3P51956 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC7.38□□□□□ -1.23
NEK3P51956 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC7.38□□□□□ -1.23
NEK3P51956 MTND2P3-201ENST00000452458 470 ntBASIC7.38□□□□□ -1.23
NEK3P51956 RPS4XP19-201ENST00000460237 736 ntBASIC7.38□□□□□ -1.23
NEK3P51956 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.38□□□□□ -1.23
NEK3P51956 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC7.38□□□□□ -1.23
NEK3P51956 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 RN7SL776P-201ENST00000493390 268 ntBASIC7.38□□□□□ -1.23
NEK3P51956 PABPC1P1-201ENST00000506347 591 ntBASIC7.38□□□□□ -1.23
NEK3P51956 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.38□□□□□ -1.23
NEK3P51956 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.38□□□□□ -1.23
NEK3P51956 OR5F2P-201ENST00000532761 941 ntBASIC7.38□□□□□ -1.23
NEK3P51956 BMS1P15-201ENST00000554269 1141 ntBASIC7.38□□□□□ -1.23
NEK3P51956 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.38□□□□□ -1.23
NEK3P51956 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 AL365223.1-201ENST00000574864 1297 ntBASIC7.38□□□□□ -1.23
NEK3P51956 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.38□□□□□ -1.23
NEK3P51956 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.38□□□□□ -1.23
NEK3P51956 AL023806.2-201ENST00000603042 263 ntBASIC7.38□□□□□ -1.23
NEK3P51956 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 AC027506.1-201ENST00000621395 198 ntBASIC7.38□□□□□ -1.23
NEK3P51956 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.38□□□□□ -1.23
NEK3P51956 CASC19-232ENST00000641480 1244 ntBASIC7.38□□□□□ -1.23
NEK3P51956 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
NEK3P51956 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 MROH3P-201ENST00000435735 2676 ntBASIC7.38□□□□□ -1.23
NEK3P51956 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.38□□□□□ -1.23
NEK3P51956 AC093909.5-201ENST00000621839 1799 ntBASIC7.38□□□□□ -1.23
NEK3P51956 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.38□□□□□ -1.23
NEK3P51956 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.38□□□□□ -1.23
NEK3P51956 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NEK3P51956 AC015871.3-201ENST00000618835 2261 ntBASIC7.38□□□□□ -1.23
NEK3P51956 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEK3P51956 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NEK3P51956 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEK3P51956 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEK3P51956 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.37□□□□□ -1.23
NEK3P51956 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.37□□□□□ -1.23
NEK3P51956 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
NEK3P51956 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.37□□□□□ -1.23
NEK3P51956 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NEK3P51956 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.37□□□□□ -1.23
NEK3P51956 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
NEK3P51956 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.37□□□□□ -1.23
NEK3P51956 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.37□□□□□ -1.23
NEK3P51956 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEK3P51956 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NEK3P51956 SUMO2P13-201ENST00000403109 272 ntBASIC7.37□□□□□ -1.23
NEK3P51956 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC7.37□□□□□ -1.23
NEK3P51956 SOD1P1-201ENST00000407803 440 ntBASIC7.37□□□□□ -1.23
NEK3P51956 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.37□□□□□ -1.23
NEK3P51956 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NEK3P51956 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.37□□□□□ -1.23
NEK3P51956 AC073900.1-201ENST00000429766 776 ntBASIC7.37□□□□□ -1.23
NEK3P51956 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.37□□□□□ -1.23
NEK3P51956 AL354983.1-201ENST00000434580 906 ntBASIC7.37□□□□□ -1.23
NEK3P51956 PMS2P11-201ENST00000451831 574 ntBASIC7.37□□□□□ -1.23
NEK3P51956 AC093799.1-201ENST00000452411 499 ntBASIC7.37□□□□□ -1.23
NEK3P51956 C1DP3-201ENST00000455013 423 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms