Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CIITAP33076 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CIITAP33076 RN7SKP191-201ENST00000364713 306 ntBASIC7.77□□□□□ -1.17
CIITAP33076 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.77□□□□□ -1.17
CIITAP33076 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CIITAP33076 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.77□□□□□ -1.17
CIITAP33076 E2F6P1-201ENST00000428850 745 ntBASIC7.77□□□□□ -1.17
CIITAP33076 RPS10P21-201ENST00000430654 475 ntBASIC7.77□□□□□ -1.17
CIITAP33076 RPL3P11-201ENST00000434028 1146 ntBASIC7.77□□□□□ -1.17
CIITAP33076 E2F6P3-201ENST00000441743 743 ntBASIC7.77□□□□□ -1.17
CIITAP33076 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.77□□□□□ -1.17
CIITAP33076 CT45A11P-201ENST00000448043 1134 ntBASIC7.77□□□□□ -1.17
CIITAP33076 RN7SL654P-201ENST00000479178 292 ntBASIC7.77□□□□□ -1.17
CIITAP33076 RN7SL350P-201ENST00000492591 299 ntBASIC7.77□□□□□ -1.17
CIITAP33076 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.77□□□□□ -1.17
CIITAP33076 AC137549.1-201ENST00000514243 533 ntBASIC7.77□□□□□ -1.17
CIITAP33076 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC7.77□□□□□ -1.17
CIITAP33076 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.77□□□□□ -1.17
CIITAP33076 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC7.77□□□□□ -1.17
CIITAP33076 MIR378C-201ENST00000578683 81 ntBASIC7.77□□□□□ -1.17
CIITAP33076 IGLJCOR18-201ENST00000584002 424 ntBASIC7.77□□□□□ -1.17
CIITAP33076 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.77□□□□□ -1.17
CIITAP33076 AL049840.6-202ENST00000603373 279 ntBASIC7.77□□□□□ -1.17
CIITAP33076 RPS4XP21-201ENST00000603814 750 ntBASIC7.77□□□□□ -1.17
CIITAP33076 AC137695.1-201ENST00000604126 489 ntBASIC7.77□□□□□ -1.17
CIITAP33076 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.77□□□□□ -1.17
CIITAP33076 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CIITAP33076 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CIITAP33076 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
CIITAP33076 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.77□□□□□ -1.17
CIITAP33076 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CIITAP33076 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CIITAP33076 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
CIITAP33076 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CIITAP33076 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CIITAP33076 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.77□□□□□ -1.17
CIITAP33076 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.76□□□□□ -1.17
CIITAP33076 DLEU2L-201ENST00000371086 3555 ntBASIC7.76□□□□□ -1.17
CIITAP33076 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.76□□□□□ -1.17
CIITAP33076 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CIITAP33076 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CIITAP33076 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CIITAP33076 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.76□□□□□ -1.17
CIITAP33076 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CIITAP33076 RN7SKP118-201ENST00000364331 330 ntBASIC7.76□□□□□ -1.17
CIITAP33076 SNORA70.3-201ENST00000365075 132 ntBASIC7.76□□□□□ -1.17
CIITAP33076 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 RPSAP60-201ENST00000415403 880 ntBASIC7.76□□□□□ -1.17
CIITAP33076 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.76□□□□□ -1.17
CIITAP33076 AC008753.1-201ENST00000423096 284 ntBASIC7.76□□□□□ -1.17
CIITAP33076 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CIITAP33076 AHCYP8-201ENST00000425108 209 ntBASIC7.76□□□□□ -1.17
CIITAP33076 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.76□□□□□ -1.17
CIITAP33076 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 HMGN1P32-201ENST00000441744 256 ntBASIC7.76□□□□□ -1.17
CIITAP33076 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.76□□□□□ -1.17
CIITAP33076 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.76□□□□□ -1.17
CIITAP33076 RPSAP24-201ENST00000461543 873 ntBASIC7.76□□□□□ -1.17
CIITAP33076 AC063955.1-201ENST00000462872 685 ntBASIC7.76□□□□□ -1.17
CIITAP33076 PGBD4P1-201ENST00000473644 407 ntBASIC7.76□□□□□ -1.17
CIITAP33076 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CIITAP33076 RN7SL267P-201ENST00000485107 261 ntBASIC7.76□□□□□ -1.17
CIITAP33076 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.76□□□□□ -1.17
CIITAP33076 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.76□□□□□ -1.17
CIITAP33076 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 AC093878.1-201ENST00000515630 432 ntBASIC7.76□□□□□ -1.17
CIITAP33076 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.76□□□□□ -1.17
CIITAP33076 OR9L1P-201ENST00000529493 933 ntBASIC7.76□□□□□ -1.17
CIITAP33076 OR5BK1P-201ENST00000550421 823 ntBASIC7.76□□□□□ -1.17
CIITAP33076 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.76□□□□□ -1.17
CIITAP33076 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.76□□□□□ -1.17
CIITAP33076 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.76□□□□□ -1.17
CIITAP33076 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 AC007671.1-201ENST00000616957 830 ntBASIC7.76□□□□□ -1.17
CIITAP33076 MIR8089-201ENST00000620165 82 ntBASIC7.76□□□□□ -1.17
CIITAP33076 SAMMSON-214ENST00000641395 1264 ntBASIC7.76□□□□□ -1.17
CIITAP33076 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CIITAP33076 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CIITAP33076 CCDC150P1-201ENST00000537123 2215 ntBASIC7.76□□□□□ -1.17
CIITAP33076 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
CIITAP33076 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CIITAP33076 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.76□□□□□ -1.17
CIITAP33076 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CIITAP33076 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CIITAP33076 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.76□□□□□ -1.17
CIITAP33076 AC079949.2-201ENST00000617117 2933 ntBASIC7.75□□□□□ -1.17
CIITAP33076 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 AC009237.3-203ENST00000442128 3551 ntBASIC7.75□□□□□ -1.17
CIITAP33076 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms