Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
P04436 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.33□□□□□ -1.4
P04436 RPL18AP14-201ENST00000417685 526 ntBASIC6.33□□□□□ -1.4
P04436 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.33□□□□□ -1.4
P04436 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.33□□□□□ -1.4
P04436 PSMD8P1-201ENST00000436275 769 ntBASIC6.33□□□□□ -1.4
P04436 HMGN1P6-201ENST00000438508 291 ntBASIC6.33□□□□□ -1.4
P04436 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
P04436 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P04436 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.33□□□□□ -1.4
P04436 AC131233.1-201ENST00000479200 955 ntBASIC6.33□□□□□ -1.4
P04436 MRPS5P3-201ENST00000515577 166 ntBASIC6.33□□□□□ -1.4
P04436 RNA5SP278-201ENST00000517055 102 ntBASIC6.33□□□□□ -1.4
P04436 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.33□□□□□ -1.4
P04436 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.33□□□□□ -1.4
P04436 PPIAP6-201ENST00000557078 499 ntBASIC6.33□□□□□ -1.4
P04436 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.33□□□□□ -1.4
P04436 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.33□□□□□ -1.4
P04436 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.33□□□□□ -1.4
P04436 AC005858.3-201ENST00000624756 589 ntBASIC6.33□□□□□ -1.4
P04436 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.33□□□□□ -1.4
P04436 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P04436 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
P04436 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.33□□□□□ -1.4
P04436 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
P04436 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P04436 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P04436 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P04436 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
P04436 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P04436 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P04436 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
P04436 CCDC150P1-201ENST00000537123 2215 ntBASIC6.33□□□□□ -1.4
P04436 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.33□□□□□ -1.4
P04436 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.33□□□□□ -1.4
P04436 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
P04436 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.32□□□□□ -1.4
P04436 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.32□□□□□ -1.4
P04436 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
P04436 RN7SKP47-201ENST00000365347 328 ntBASIC6.32□□□□□ -1.4
P04436 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 PPIAP26-201ENST00000377951 522 ntBASIC6.32□□□□□ -1.4
P04436 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
P04436 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.32□□□□□ -1.4
P04436 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.32□□□□□ -1.4
P04436 RN7SKP205-201ENST00000410999 307 ntBASIC6.32□□□□□ -1.4
P04436 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC6.32□□□□□ -1.4
P04436 AC000089.1-201ENST00000424559 801 ntBASIC6.32□□□□□ -1.4
P04436 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.32□□□□□ -1.4
P04436 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
P04436 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.32□□□□□ -1.4
P04436 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.32□□□□□ -1.4
P04436 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.32□□□□□ -1.4
P04436 NMNAT1P3-201ENST00000457517 888 ntBASIC6.32□□□□□ -1.4
P04436 RN7SKP198-201ENST00000459286 306 ntBASIC6.32□□□□□ -1.4
P04436 RN7SL790P-201ENST00000474043 298 ntBASIC6.32□□□□□ -1.4
P04436 RN7SL654P-201ENST00000479178 292 ntBASIC6.32□□□□□ -1.4
P04436 RN7SL655P-201ENST00000486087 298 ntBASIC6.32□□□□□ -1.4
P04436 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.32□□□□□ -1.4
P04436 AC112225.1-201ENST00000508230 297 ntBASIC6.32□□□□□ -1.4
P04436 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.32□□□□□ -1.4
P04436 RN7SKP64-201ENST00000517206 328 ntBASIC6.32□□□□□ -1.4
P04436 EEF1B2P2-201ENST00000519625 676 ntBASIC6.32□□□□□ -1.4
P04436 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.32□□□□□ -1.4
P04436 CHEK2P2-201ENST00000554701 672 ntBASIC6.32□□□□□ -1.4
P04436 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.32□□□□□ -1.4
P04436 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.32□□□□□ -1.4
P04436 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.32□□□□□ -1.4
P04436 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.32□□□□□ -1.4
P04436 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.32□□□□□ -1.4
P04436 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
P04436 AC111186.1-201ENST00000604684 130 ntBASIC6.32□□□□□ -1.4
P04436 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.32□□□□□ -1.4
P04436 AL139317.4-201ENST00000605879 760 ntBASIC6.32□□□□□ -1.4
P04436 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.32□□□□□ -1.4
P04436 AC026951.2-201ENST00000613847 241 ntBASIC6.32□□□□□ -1.4
P04436 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.32□□□□□ -1.4
P04436 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 AL137918.1-201ENST00000624542 1922 ntBASIC6.32□□□□□ -1.4
P04436 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.32□□□□□ -1.4
P04436 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.32□□□□□ -1.4
P04436 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
P04436 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.32□□□□□ -1.4
P04436 FLJ42393-201ENST00000623801 2270 ntBASIC6.32□□□□□ -1.4
P04436 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P04436 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
P04436 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
P04436 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 232.5 ms