Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AL390840.1-201ENST00000420303 988 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 NPM1P30-201ENST00000425092 828 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 RPL6P2-201ENST00000425480 783 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 FAF2P1-201ENST00000429974 1298 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 EIF3IP1-201ENST00000433048 967 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AL590648.1-201ENST00000456479 460 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AC115223.1-201ENST00000466377 870 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AC006070.1-201ENST00000508151 193 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 KCTD9P4-201ENST00000526766 1166 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AP006587.5-201ENST00000532033 739 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 CCDC58P5-201ENST00000536923 432 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AC136944.5-201ENST00000573021 151 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AL023806.2-201ENST00000603042 263 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AL356052.1-201ENST00000605764 376 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 OR13Z2P-201ENST00000606338 555 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AC023310.4-201ENST00000613130 650 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AL049541.2-201ENST00000626377 555 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AC006213.6-201ENST00000623722 4179 ntBASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RCL1Q9Y2P8 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 MAPK10-357ENST00000641831 2858 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 RNA5SP260-201ENST00000363849 111 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 SNORA70H-201ENST00000383910 135 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 SNORA70J-201ENST00000384182 135 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 GAPDHP46-201ENST00000424043 994 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 SUMO2P8-201ENST00000434672 286 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AL604028.2-201ENST00000437848 788 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AL135929.1-201ENST00000449287 552 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 RPS18P13-201ENST00000461260 454 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 IGLV10-67-201ENST00000519446 325 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 OR7E2P-201ENST00000533071 889 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AL355076.3-201ENST00000555838 587 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC074051.4-201ENST00000564888 892 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AL136141.1-201ENST00000605780 369 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AL354718.1-201ENST00000619764 589 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC106795.5-201ENST00000623288 454 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 AC063952.1-203ENST00000634410 658 ntBASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RCL1Q9Y2P8 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.59□□□□□ -1.52
RCL1Q9Y2P8 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.59□□□□□ -1.52
RCL1Q9Y2P8 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.59□□□□□ -1.52
RCL1Q9Y2P8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
RCL1Q9Y2P8 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
RCL1Q9Y2P8 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RCL1Q9Y2P8 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RCL1Q9Y2P8 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RCL1Q9Y2P8 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms