Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 AC073909.1-201ENST00000447112 999 ntBASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 NUCKS1P1-201ENST00000452067 703 ntBASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 MIR4697-201ENST00000582977 78 ntBASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 RN7SKP161-201ENST00000411110 305 ntBASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 AC245060.4-201ENST00000413293 1121 ntBASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 RBMY2KP-201ENST00000418221 992 ntBASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 AL512637.1-201ENST00000439523 1231 ntBASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 AC005077.1-201ENST00000449226 375 ntBASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 AL133445.1-201ENST00000467051 452 ntBASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 OR4A1P-201ENST00000532342 920 ntBASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 AP003115.1-201ENST00000569849 463 ntBASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 ADAMTS12-203ENST00000504830 8774 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RIMBP3Q9UFD9 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC10.46□□□□□ -0.73
RIMBP3Q9UFD9 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RIMBP3Q9UFD9 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RIMBP3Q9UFD9 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC10.46□□□□□ -0.73
RIMBP3Q9UFD9 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RIMBP3Q9UFD9 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RIMBP3Q9UFD9 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC10.46□□□□□ -0.73
RIMBP3Q9UFD9 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RIMBP3Q9UFD9 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC10.46□□□□□ -0.73
RIMBP3Q9UFD9 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC10.46□□□□□ -0.73
RIMBP3Q9UFD9 XIST-206ENST00000434839 2865 ntTSL 5 BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 BX284632.2-201ENST00000421091 399 ntBASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 AL022100.1-202ENST00000421214 548 ntBASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 AC130360.1-201ENST00000425489 1117 ntBASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 AL512605.1-202ENST00000441919 381 ntBASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 NDUFAF4P2-201ENST00000445374 520 ntBASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 AL359955.2-201ENST00000445380 353 ntBASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 AC008429.2-201ENST00000523057 864 ntBASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 AC130365.2-201ENST00000525882 1201 ntBASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 Six3os1_4.1-201ENST00000615706 324 ntBASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 AC004014.2-201ENST00000623718 5122 ntBASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 BRD7P2-201ENST00000466133 1944 ntBASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC10.46□□□□□ -0.74
RIMBP3Q9UFD9 MFSD4BP1-201ENST00000513330 1552 ntBASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 GLYATL1P1-201ENST00000528297 1607 ntBASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 CNTNAP4-201ENST00000307431 4867 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 CYCSP17-201ENST00000407870 315 ntBASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 TNPO1P1-201ENST00000423641 1138 ntBASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 IGLV3-4-201ENST00000432300 244 ntBASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 DUTP7-201ENST00000507982 486 ntBASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 AC021001.1-201ENST00000518703 987 ntBASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
RIMBP3Q9UFD9 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms