Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC092647.3-201ENST00000443044 633 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 SUMO2P1-206ENST00000445436 284 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AL122001.1-201ENST00000457027 370 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 snoU109.3-201ENST00000459477 145 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC104982.1-201ENST00000478775 574 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 RPL23AP73-201ENST00000492507 471 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC087257.2-201ENST00000538759 928 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC068631.3-201ENST00000538831 225 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 RN7SL657P-201ENST00000582431 293 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 U47924.1-201ENST00000606539 434 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC004477.3-201ENST00000614061 590 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC090983.1-201ENST00000623426 3897 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AC090132.1-201ENST00000524071 1480 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 PWRN1-212ENST00000569908 1435 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC079248.1-201ENST00000427568 1546 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 RBMX2P2-201ENST00000257020 946 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 RN7SKP63-201ENST00000363187 301 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 RNU6-40P-201ENST00000384254 107 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 RN7SKP131-201ENST00000410698 301 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 MARK2P12-201ENST00000420129 585 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC092570.2-201ENST00000452117 1143 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC096992.1-201ENST00000459808 709 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 RN7SL688P-201ENST00000471754 275 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC008799.2-201ENST00000484429 647 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 OR9N1P-201ENST00000491296 333 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 RN7SL569P-201ENST00000494652 288 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC010627.1-201ENST00000503819 1294 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 MTCO3P27-201ENST00000514397 196 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 OSBPL9P3-201ENST00000534523 595 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 OR8K4P-201ENST00000534608 872 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AL132640.2-202ENST00000559732 614 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 FAM60CP-201ENST00000591086 664 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 DIMT1P1-201ENST00000603970 763 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AP000864.1-201ENST00000609424 650 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC068880.4-201ENST00000623082 495 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AP000676.4-201ENST00000624659 623 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms