Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL121916.1-201ENST00000429405 308 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 RPE-205ENST00000429907 925 ntTSL 2 BASIC4.9□□□□□ -1.63
CKS1BP61024 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC4.9□□□□□ -1.63
CKS1BP61024 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC4.9□□□□□ -1.63
CKS1BP61024 AP1B1P1-202ENST00000448124 191 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 MGAT2P1-201ENST00000449718 797 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC4.9□□□□□ -1.63
CKS1BP61024 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC4.9□□□□□ -1.63
CKS1BP61024 RN7SL12P-201ENST00000473849 290 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 RN7SL687P-201ENST00000480496 285 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 RN7SL272P-201ENST00000487762 289 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 AC026826.1-201ENST00000493002 361 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC4.9□□□□□ -1.63
CKS1BP61024 SUMO2P4-201ENST00000504193 276 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.9□□□□□ -1.63
CKS1BP61024 SNORA70.23-201ENST00000517218 151 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 IGHVII-22-1-201ENST00000517888 265 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC4.9□□□□□ -1.63
CKS1BP61024 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC4.9□□□□□ -1.63
CKS1BP61024 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC4.9□□□□□ -1.63
CKS1BP61024 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC4.9□□□□□ -1.63
CKS1BP61024 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 BMS1P15-201ENST00000554269 1141 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC4.9□□□□□ -1.63
CKS1BP61024 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC4.9□□□□□ -1.63
CKS1BP61024 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 CDH13-207ENST00000565636 810 ntTSL 5 BASIC4.9□□□□□ -1.63
CKS1BP61024 RN7SL237P-201ENST00000580912 287 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC4.9□□□□□ -1.63
CKS1BP61024 DTNA-220ENST00000590831 847 ntTSL 2 BASIC4.9□□□□□ -1.63
CKS1BP61024 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC4.9□□□□□ -1.63
CKS1BP61024 OR13Z2P-201ENST00000606338 555 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC4.9□□□□□ -1.63
CKS1BP61024 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC4.9□□□□□ -1.63
CKS1BP61024 AC016394.1-201ENST00000608444 833 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 AC245028.3-201ENST00000618197 285 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 AL596275.2-203ENST00000641951 371 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CKS1BP61024 BIN2P1-201ENST00000504996 1530 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.9□□□□□ -1.63
CKS1BP61024 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 AC023245.2-201ENST00000530760 2978 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.9□□□□□ -1.63
CKS1BP61024 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
CKS1BP61024 MAPK10-338ENST00000641647 3362 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 MARK2P10-201ENST00000454959 1437 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CKS1BP61024 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.89□□□□□ -1.63
CKS1BP61024 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CKS1BP61024 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CKS1BP61024 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC4.89□□□□□ -1.63
CKS1BP61024 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CKS1BP61024 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CKS1BP61024 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CKS1BP61024 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CKS1BP61024 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CKS1BP61024 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC4.89□□□□□ -1.63
CKS1BP61024 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CKS1BP61024 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CKS1BP61024 MIR133A2-201ENST00000347538 102 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 RNA5SP279-201ENST00000365513 117 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CKS1BP61024 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CKS1BP61024 GZMB-203ENST00000382542 666 ntTSL 2 BASIC4.89□□□□□ -1.63
CKS1BP61024 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CKS1BP61024 CNN3P1-201ENST00000401596 935 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 SNORA3.1-201ENST00000408166 111 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC4.89□□□□□ -1.63
CKS1BP61024 AC004129.1-201ENST00000417617 796 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 GNG5P5-201ENST00000420444 220 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 AC009506.2-201ENST00000420635 840 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC4.89□□□□□ -1.63
CKS1BP61024 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC4.89□□□□□ -1.63
CKS1BP61024 DUTP4-201ENST00000424782 475 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 RPL5P2-201ENST00000429598 854 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 EIF3IP1-201ENST00000433048 967 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 AC244505.2-201ENST00000435089 759 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC4.89□□□□□ -1.63
CKS1BP61024 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC4.89□□□□□ -1.63
CKS1BP61024 RN7SL414P-201ENST00000469545 294 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CKS1BP61024 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC4.89□□□□□ -1.63
CKS1BP61024 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC4.89□□□□□ -1.63
CKS1BP61024 NPM1P28-201ENST00000492269 840 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC4.89□□□□□ -1.63
CKS1BP61024 PABPC1P1-201ENST00000506347 591 ntBASIC4.89□□□□□ -1.63
CKS1BP61024 AC120036.3-201ENST00000517826 292 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms