Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CIITAP33076 AL079341.1-201ENST00000404701 1207 ntBASIC7.79□□□□□ -1.16
CIITAP33076 OR52N3P-201ENST00000413417 934 ntBASIC7.79□□□□□ -1.16
CIITAP33076 MEF2AP1-201ENST00000454867 863 ntBASIC7.79□□□□□ -1.16
CIITAP33076 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.79□□□□□ -1.16
CIITAP33076 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.79□□□□□ -1.16
CIITAP33076 RN7SL390P-201ENST00000470634 284 ntBASIC7.79□□□□□ -1.16
CIITAP33076 AC026826.1-201ENST00000493002 361 ntBASIC7.79□□□□□ -1.16
CIITAP33076 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.79□□□□□ -1.16
CIITAP33076 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.79□□□□□ -1.16
CIITAP33076 AC021220.1-201ENST00000507445 630 ntBASIC7.79□□□□□ -1.16
CIITAP33076 OR10J9P-201ENST00000511932 987 ntBASIC7.79□□□□□ -1.16
CIITAP33076 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.79□□□□□ -1.16
CIITAP33076 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.79□□□□□ -1.16
CIITAP33076 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
CIITAP33076 AP006587.5-201ENST00000532033 739 ntBASIC7.79□□□□□ -1.16
CIITAP33076 AL591767.3-201ENST00000554632 525 ntBASIC7.79□□□□□ -1.16
CIITAP33076 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC7.79□□□□□ -1.16
CIITAP33076 SNORA70D-201ENST00000578836 135 ntBASIC7.79□□□□□ -1.16
CIITAP33076 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.79□□□□□ -1.16
CIITAP33076 MIR4312-201ENST00000579909 76 ntBASIC7.79□□□□□ -1.16
CIITAP33076 U91328.4-201ENST00000608919 517 ntBASIC7.79□□□□□ -1.16
CIITAP33076 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.79□□□□□ -1.16
CIITAP33076 AC106782.7-201ENST00000624024 418 ntBASIC7.79□□□□□ -1.16
CIITAP33076 AC133555.5-201ENST00000624430 418 ntBASIC7.79□□□□□ -1.16
CIITAP33076 SNORA16A-202ENST00000628458 135 ntBASIC7.79□□□□□ -1.16
CIITAP33076 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CIITAP33076 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CIITAP33076 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CIITAP33076 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CIITAP33076 UG0898H09-202ENST00000623646 7040 ntBASIC7.79□□□□□ -1.16
CIITAP33076 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CIITAP33076 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CIITAP33076 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.79□□□□□ -1.16
CIITAP33076 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.79□□□□□ -1.16
CIITAP33076 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.79□□□□□ -1.16
CIITAP33076 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.79□□□□□ -1.16
CIITAP33076 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.79□□□□□ -1.16
CIITAP33076 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.79□□□□□ -1.16
CIITAP33076 RPS2P45-201ENST00000469997 2057 ntBASIC7.79□□□□□ -1.16
CIITAP33076 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CIITAP33076 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.78□□□□□ -1.16
CIITAP33076 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CIITAP33076 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CIITAP33076 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 SNORA70G-201ENST00000383923 142 ntBASIC7.78□□□□□ -1.16
CIITAP33076 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.78□□□□□ -1.16
CIITAP33076 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.78□□□□□ -1.16
CIITAP33076 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.78□□□□□ -1.16
CIITAP33076 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.78□□□□□ -1.16
CIITAP33076 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.78□□□□□ -1.16
CIITAP33076 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.78□□□□□ -1.16
CIITAP33076 AP005902.2-201ENST00000518393 307 ntBASIC7.78□□□□□ -1.16
CIITAP33076 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC7.78□□□□□ -1.16
CIITAP33076 AC087752.2-201ENST00000521219 281 ntBASIC7.78□□□□□ -1.16
CIITAP33076 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC7.78□□□□□ -1.16
CIITAP33076 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC7.78□□□□□ -1.16
CIITAP33076 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.78□□□□□ -1.16
CIITAP33076 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC7.78□□□□□ -1.16
CIITAP33076 AC022001.1-201ENST00000605193 268 ntBASIC7.78□□□□□ -1.16
CIITAP33076 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.78□□□□□ -1.16
CIITAP33076 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 AC020658.2-201ENST00000559030 4020 ntBASIC7.78□□□□□ -1.16
CIITAP33076 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.78□□□□□ -1.16
CIITAP33076 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CIITAP33076 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CIITAP33076 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.78□□□□□ -1.16
CIITAP33076 AL034417.4-202ENST00000642135 2236 ntBASIC7.78□□□□□ -1.16
CIITAP33076 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.78□□□□□ -1.16
CIITAP33076 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 MFSD8-217ENST00000641178 4374 ntBASIC7.78□□□□□ -1.16
CIITAP33076 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.78□□□□□ -1.16
CIITAP33076 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CIITAP33076 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
CIITAP33076 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
CIITAP33076 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CIITAP33076 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CIITAP33076 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CIITAP33076 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms