Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHRNB1P11230 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.21□□□□□ -1.26
CHRNB1P11230 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.21□□□□□ -1.26
CHRNB1P11230 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CHRNB1P11230 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CHRNB1P11230 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHRNB1P11230 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.21□□□□□ -1.26
CHRNB1P11230 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.21□□□□□ -1.26
CHRNB1P11230 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHRNB1P11230 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHRNB1P11230 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHRNB1P11230 AC022819.1-201ENST00000563495 3910 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CHRNB1P11230 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 AL162456.1-201ENST00000634535 2006 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 AC138627.1-203ENST00000641872 1680 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 RN7SKP189-201ENST00000365042 330 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.2□□□□□ -1.26
CHRNB1P11230 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.2□□□□□ -1.26
CHRNB1P11230 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 CDC42P6-201ENST00000421246 576 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 AC000089.1-201ENST00000424559 801 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.2□□□□□ -1.26
CHRNB1P11230 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.2□□□□□ -1.26
CHRNB1P11230 RPL7AP71-201ENST00000451120 739 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.2□□□□□ -1.26
CHRNB1P11230 RPL23P10-201ENST00000468780 412 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 PPP1R2P6-201ENST00000478565 588 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 RPL37P23-201ENST00000492641 294 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 SCARNA6-201ENST00000515982 265 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 Vault.2-201ENST00000516519 98 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.2□□□□□ -1.26
CHRNB1P11230 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.2□□□□□ -1.26
CHRNB1P11230 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.2□□□□□ -1.26
CHRNB1P11230 AC121758.1-202ENST00000556917 658 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.2□□□□□ -1.26
CHRNB1P11230 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.2□□□□□ -1.26
CHRNB1P11230 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.2□□□□□ -1.26
CHRNB1P11230 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 AL049840.6-202ENST00000603373 279 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 AC090953.1-201ENST00000604305 1092 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.2□□□□□ -1.26
CHRNB1P11230 AC139795.3-201ENST00000606358 541 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 AP003400.6-201ENST00000624698 740 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CHRNB1P11230 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CHRNB1P11230 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 AC122713.2-201ENST00000624942 3335 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.2□□□□□ -1.26
CHRNB1P11230 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHRNB1P11230 NBPF8-201ENST00000583271 5330 ntBASIC7.2□□□□□ -1.26
CHRNB1P11230 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CHRNB1P11230 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CHRNB1P11230 AL031651.1-201ENST00000615357 1438 ntBASIC7.19□□□□□ -1.26
CHRNB1P11230 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHRNB1P11230 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHRNB1P11230 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHRNB1P11230 AC123769.2-201ENST00000624332 5984 ntBASIC7.19□□□□□ -1.26
CHRNB1P11230 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CHRNB1P11230 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CHRNB1P11230 AC006058.1-201ENST00000568686 5067 ntBASIC7.19□□□□□ -1.26
CHRNB1P11230 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CHRNB1P11230 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.19□□□□□ -1.26
CHRNB1P11230 ZNF658B-201ENST00000602828 3408 ntBASIC7.19□□□□□ -1.26
CHRNB1P11230 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.19□□□□□ -1.26
CHRNB1P11230 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.19□□□□□ -1.26
CHRNB1P11230 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CHRNB1P11230 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CHRNB1P11230 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
CHRNB1P11230 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHRNB1P11230 CUBNP3-201ENST00000457461 1784 ntBASIC7.19□□□□□ -1.26
CHRNB1P11230 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHRNB1P11230 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CHRNB1P11230 AC010894.1-201ENST00000313760 361 ntBASIC7.19□□□□□ -1.26
CHRNB1P11230 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CHRNB1P11230 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CHRNB1P11230 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHRNB1P11230 UBTFL2-201ENST00000411859 1191 ntBASIC7.19□□□□□ -1.26
CHRNB1P11230 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.19□□□□□ -1.26
CHRNB1P11230 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.19□□□□□ -1.26
CHRNB1P11230 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.19□□□□□ -1.26
CHRNB1P11230 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.19□□□□□ -1.26
CHRNB1P11230 AL139184.1-202ENST00000422303 222 ntBASIC7.19□□□□□ -1.26
CHRNB1P11230 AC012497.1-201ENST00000429392 575 ntBASIC7.19□□□□□ -1.26
CHRNB1P11230 AC128677.1-201ENST00000436016 442 ntBASIC7.19□□□□□ -1.26
CHRNB1P11230 RPL12P11-201ENST00000439970 501 ntBASIC7.19□□□□□ -1.26
CHRNB1P11230 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.19□□□□□ -1.26
CHRNB1P11230 TIMM8BP2-201ENST00000445940 251 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms