Protein–RNA interactions for Protein: Q9Y6R1

SLC4A4, Electrogenic sodium bicarbonate cotransporter 1, humanhuman

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A4Q9Y6R1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.79■■□□□ 1.4
SLC4A4Q9Y6R1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.79■■□□□ 1.4
SLC4A4Q9Y6R1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.79■■□□□ 1.4
SLC4A4Q9Y6R1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.79■■□□□ 1.4
SLC4A4Q9Y6R1 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.79■■□□□ 1.4
SLC4A4Q9Y6R1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.79■■□□□ 1.4
SLC4A4Q9Y6R1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.79■■□□□ 1.4
SLC4A4Q9Y6R1 AL121906.2-201ENST00000621597 723 ntBASIC23.79■■□□□ 1.4
SLC4A4Q9Y6R1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.79■■□□□ 1.4
SLC4A4Q9Y6R1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC4A4Q9Y6R1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 PRKY-204ENST00000533551 1019 ntBASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.78■■□□□ 1.4
SLC4A4Q9Y6R1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 BX119927.1-201ENST00000636596 1552 ntBASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC4A4Q9Y6R1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 LINC01006-201ENST00000333319 2292 ntBASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 UBE2SP1-201ENST00000450587 669 ntBASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 AC133681.1-201ENST00000465482 601 ntBASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.76■■□□□ 1.39
SLC4A4Q9Y6R1 AL162377.1-201ENST00000618844 1793 ntBASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.75■■□□□ 1.39
SLC4A4Q9Y6R1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 AL391422.3-201ENST00000603791 2761 ntBASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 AC093827.2-201ENST00000512654 315 ntBASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC4A4Q9Y6R1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.73■■□□□ 1.39
SLC4A4Q9Y6R1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC4A4Q9Y6R1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
SLC4A4Q9Y6R1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SLC4A4Q9Y6R1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms