Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TNFRSF11AQ9Y6Q6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 HLA-G-202ENST00000376815 851 ntBASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 HLA-G-203ENST00000376818 1127 ntBASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.47■■□□□ 1.51
TNFRSF11AQ9Y6Q6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 PCDHAC2-203ENST00000615316 3011 ntBASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TNFRSF11AQ9Y6Q6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.45■■□□□ 1.51
TNFRSF11AQ9Y6Q6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.45■■□□□ 1.51
TNFRSF11AQ9Y6Q6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 PNN-205ENST00000556530 601 ntTSL 2 BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.45■■□□□ 1.5
TNFRSF11AQ9Y6Q6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 KRASP1-201ENST00000407852 552 ntBASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AL121829.2-201ENST00000620908 328 ntBASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms