Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 AC005332.7-201ENST00000614046 2005 ntBASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 AC138907.5-202ENST00000569484 235 ntBASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 AP000974.1-201ENST00000623909 2387 ntBASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LSM4Q9Y4Z0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 MIR4651-201ENST00000582622 73 ntBASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.9■□□□□ 0.14
LSM4Q9Y4Z0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 BX119927.1-201ENST00000636596 1552 ntBASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 KRT8P36-201ENST00000489121 1440 ntBASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 AC010141.2-201ENST00000452426 721 ntBASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 AC105036.2-201ENST00000569468 176 ntBASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 AC010536.3-201ENST00000620306 533 ntBASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.89■□□□□ 0.13
LSM4Q9Y4Z0 TNXA-203ENST00000507684 2038 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms