Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 AC009102.2-201ENST00000606772 1639 ntBASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 AL691432.2-201ENST00000607222 2038 ntBASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 AP006587.3-201ENST00000525742 1516 ntBASIC18.9■□□□□ 0.62
LRCH1Q9Y2L9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRCH1Q9Y2L9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
LRCH1Q9Y2L9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
LRCH1Q9Y2L9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
LRCH1Q9Y2L9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRCH1Q9Y2L9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 BX005040.4-201ENST00000637145 1518 ntBASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH1Q9Y2L9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 AL139246.5-201ENST00000606645 996 ntBASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LRCH1Q9Y2L9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms