Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC26.14■■□□□ 1.78
SPG7Q9UQ90 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC26.14■■□□□ 1.78
SPG7Q9UQ90 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC26.14■■□□□ 1.78
SPG7Q9UQ90 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC26.14■■□□□ 1.78
SPG7Q9UQ90 P4HB-223ENST00000576390 439 ntTSL 4 BASIC26.14■■□□□ 1.78
SPG7Q9UQ90 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SPG7Q9UQ90 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC26.14■■□□□ 1.78
SPG7Q9UQ90 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SPG7Q9UQ90 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SPG7Q9UQ90 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SPG7Q9UQ90 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
SPG7Q9UQ90 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SPG7Q9UQ90 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26.14■■□□□ 1.77
SPG7Q9UQ90 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SPG7Q9UQ90 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 LINC01568-207ENST00000641790 1380 ntBASIC26.13■■□□□ 1.77
SPG7Q9UQ90 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 AL445228.2-201ENST00000605589 952 ntBASIC26.13■■□□□ 1.77
SPG7Q9UQ90 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 AC005229.4-201ENST00000610085 2198 ntBASIC26.13■■□□□ 1.77
SPG7Q9UQ90 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 AP006587.1-201ENST00000534129 1502 ntBASIC26.13■■□□□ 1.77
SPG7Q9UQ90 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPG7Q9UQ90 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 AL390955.1-201ENST00000428694 934 ntBASIC26.12■■□□□ 1.77
SPG7Q9UQ90 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 NAPSB-206ENST00000562112 1266 ntBASIC26.12■■□□□ 1.77
SPG7Q9UQ90 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC26.12■■□□□ 1.77
SPG7Q9UQ90 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
SPG7Q9UQ90 CYP2D8P-201ENST00000433633 1490 ntBASIC26.11■■□□□ 1.77
SPG7Q9UQ90 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 AC005521.1-201ENST00000393351 872 ntBASIC26.1■■□□□ 1.77
SPG7Q9UQ90 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 C1QL1P1-201ENST00000568105 661 ntBASIC26.1■■□□□ 1.77
SPG7Q9UQ90 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 AL031985.4-201ENST00000642138 673 ntBASIC26.1■■□□□ 1.77
SPG7Q9UQ90 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 FP700111.2-201ENST00000619190 1892 ntBASIC26.1■■□□□ 1.77
SPG7Q9UQ90 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SPG7Q9UQ90 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms