Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF2Q9P2I0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 AC125437.2-201ENST00000625180 2167 ntBASIC20■□□□□ 0.79
CPSF2Q9P2I0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 AC007322.3-201ENST00000426526 701 ntBASIC20■□□□□ 0.79
CPSF2Q9P2I0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 DPP3P2-201ENST00000416030 1696 ntBASIC20■□□□□ 0.79
CPSF2Q9P2I0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20■□□□□ 0.79
CPSF2Q9P2I0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF2Q9P2I0 AC018445.3-201ENST00000624177 1945 ntBASIC20■□□□□ 0.79
CPSF2Q9P2I0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.99■□□□□ 0.79
CPSF2Q9P2I0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms