Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 BX119927.1-201ENST00000636596 1552 ntBASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SPHK1Q9NYA1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 KRT16P6-202ENST00000425692 1426 ntBASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPHK1Q9NYA1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 GCSHP5-201ENST00000443090 522 ntBASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 C1QBPP2-201ENST00000528754 825 ntBASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPHK1Q9NYA1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 AL158047.1-201ENST00000445918 881 ntBASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 AC142381.4-202ENST00000563973 229 ntBASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 AL023875.1-201ENST00000640777 796 ntBASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPHK1Q9NYA1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms