Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 KRT16P1-201ENST00000399124 1418 ntBASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCFC1R1Q9NWW0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 AC116562.2-201ENST00000507042 360 ntBASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
HCFC1R1Q9NWW0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.77■□□□□ 0.91
HCFC1R1Q9NWW0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
HCFC1R1Q9NWW0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HCFC1R1Q9NWW0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HCFC1R1Q9NWW0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCFC1R1Q9NWW0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCFC1R1Q9NWW0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
HCFC1R1Q9NWW0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.76■□□□□ 0.91
HCFC1R1Q9NWW0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HCFC1R1Q9NWW0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.76■□□□□ 0.91
HCFC1R1Q9NWW0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HCFC1R1Q9NWW0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HCFC1R1Q9NWW0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCFC1R1Q9NWW0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HCFC1R1Q9NWW0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCFC1R1Q9NWW0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.76■□□□□ 0.91
HCFC1R1Q9NWW0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 LINC01568-207ENST00000641790 1380 ntBASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 AC006128.1-201ENST00000624704 1661 ntBASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 AC005521.1-201ENST00000393351 872 ntBASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 KRT18P35-201ENST00000510488 1269 ntBASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 AC005363.2-201ENST00000618631 242 ntBASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
HCFC1R1Q9NWW0 AP006587.1-201ENST00000534129 1502 ntBASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC1R1Q9NWW0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 FITM1-202ENST00000559294 800 ntBASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 AC010947.1-201ENST00000623454 693 ntBASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 AC092865.7-201ENST00000641832 219 ntBASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms