Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SLC52A1Q9NWF4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SLC52A1Q9NWF4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC28.72■■■□□ 2.19
SLC52A1Q9NWF4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC28.72■■■□□ 2.19
SLC52A1Q9NWF4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SLC52A1Q9NWF4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
SLC52A1Q9NWF4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
SLC52A1Q9NWF4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC28.72■■■□□ 2.19
SLC52A1Q9NWF4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
SLC52A1Q9NWF4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC28.72■■■□□ 2.19
SLC52A1Q9NWF4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SLC52A1Q9NWF4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SLC52A1Q9NWF4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 ATP5G1P1-201ENST00000448724 379 ntBASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 AC128688.1-201ENST00000487626 519 ntBASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 AC097488.1-201ENST00000507834 756 ntBASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SLC52A1Q9NWF4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SLC52A1Q9NWF4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC28.7■■■□□ 2.19
SLC52A1Q9NWF4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
SLC52A1Q9NWF4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC28.7■■■□□ 2.19
SLC52A1Q9NWF4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SLC52A1Q9NWF4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
SLC52A1Q9NWF4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC28.7■■■□□ 2.18
SLC52A1Q9NWF4 BX664615.1-201ENST00000443558 458 ntBASIC28.7■■■□□ 2.18
SLC52A1Q9NWF4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC28.7■■■□□ 2.18
SLC52A1Q9NWF4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC28.7■■■□□ 2.18
SLC52A1Q9NWF4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC28.7■■■□□ 2.18
SLC52A1Q9NWF4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SLC52A1Q9NWF4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SLC52A1Q9NWF4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 AC130371.2-201ENST00000619443 611 ntBASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 AC131212.4-201ENST00000623606 975 ntBASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
SLC52A1Q9NWF4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC28.68■■■□□ 2.18
SLC52A1Q9NWF4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SLC52A1Q9NWF4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC28.68■■■□□ 2.18
SLC52A1Q9NWF4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC28.68■■■□□ 2.18
SLC52A1Q9NWF4 AP000692.2-201ENST00000608391 879 ntBASIC28.68■■■□□ 2.18
SLC52A1Q9NWF4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC28.68■■■□□ 2.18
SLC52A1Q9NWF4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC28.68■■■□□ 2.18
SLC52A1Q9NWF4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SLC52A1Q9NWF4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SLC52A1Q9NWF4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 CRYGFP-201ENST00000418459 633 ntBASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 AC063952.2-201ENST00000498792 1227 ntBASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
SLC52A1Q9NWF4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC28.66■■■□□ 2.18
SLC52A1Q9NWF4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SLC52A1Q9NWF4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SLC52A1Q9NWF4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SLC52A1Q9NWF4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SLC52A1Q9NWF4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
SLC52A1Q9NWF4 INGX-201ENST00000359239 846 ntBASIC28.66■■■□□ 2.18
SLC52A1Q9NWF4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms