Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.33■■□□□ 1.49
ECHDC1Q9NTX5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.33■■□□□ 1.49
ECHDC1Q9NTX5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ECHDC1Q9NTX5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.33■■□□□ 1.49
ECHDC1Q9NTX5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.33■■□□□ 1.49
ECHDC1Q9NTX5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ECHDC1Q9NTX5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ECHDC1Q9NTX5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.33■■□□□ 1.49
ECHDC1Q9NTX5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC24.33■■□□□ 1.49
ECHDC1Q9NTX5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ECHDC1Q9NTX5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
ECHDC1Q9NTX5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.33■■□□□ 1.48
ECHDC1Q9NTX5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
ECHDC1Q9NTX5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
ECHDC1Q9NTX5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.33■■□□□ 1.48
ECHDC1Q9NTX5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.33■■□□□ 1.48
ECHDC1Q9NTX5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 CD99P1-205ENST00000527459 561 ntBASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 AC008403.3-201ENST00000598924 454 ntBASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
ECHDC1Q9NTX5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
ECHDC1Q9NTX5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ECHDC1Q9NTX5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ECHDC1Q9NTX5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.31■■□□□ 1.48
ECHDC1Q9NTX5 ABHD17AP6-201ENST00000458502 1044 ntBASIC24.31■■□□□ 1.48
ECHDC1Q9NTX5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
ECHDC1Q9NTX5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.31■■□□□ 1.48
ECHDC1Q9NTX5 AC008687.6-201ENST00000596318 630 ntBASIC24.31■■□□□ 1.48
ECHDC1Q9NTX5 PCDHAC2-203ENST00000615316 3011 ntBASIC24.31■■□□□ 1.48
ECHDC1Q9NTX5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ECHDC1Q9NTX5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ECHDC1Q9NTX5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 RPS2P52-201ENST00000469610 820 ntBASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 AC120498.8-201ENST00000614275 531 ntBASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 AC124283.5-201ENST00000624661 1809 ntBASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
ECHDC1Q9NTX5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 PHGDH-210ENST00000641115 1638 ntBASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ECHDC1Q9NTX5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 AP003097.1-201ENST00000530657 1135 ntBASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.28■■□□□ 1.48
ECHDC1Q9NTX5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms