Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CISHQ9NSE2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.3■■□□□ 1
CISHQ9NSE2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CISHQ9NSE2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.3■■□□□ 1
CISHQ9NSE2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.3■■□□□ 1
CISHQ9NSE2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.3■■□□□ 1
CISHQ9NSE2 SOX15-203ENST00000570788 1093 ntBASIC21.3■■□□□ 1
CISHQ9NSE2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
CISHQ9NSE2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.3■■□□□ 1
CISHQ9NSE2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CISHQ9NSE2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.3■■□□□ 1
CISHQ9NSE2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CISHQ9NSE2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.3■■□□□ 1
CISHQ9NSE2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CISHQ9NSE2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CISHQ9NSE2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.29■■□□□ 1
CISHQ9NSE2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.29■■□□□ 1
CISHQ9NSE2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CISHQ9NSE2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CISHQ9NSE2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CISHQ9NSE2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CISHQ9NSE2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.29■■□□□ 1
CISHQ9NSE2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.29■■□□□ 1
CISHQ9NSE2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.29■■□□□ 1
CISHQ9NSE2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.29■■□□□ 1
CISHQ9NSE2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CISHQ9NSE2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.29■■□□□ 1
CISHQ9NSE2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.29■■□□□ 1
CISHQ9NSE2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.29■■□□□ 1
CISHQ9NSE2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CISHQ9NSE2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.28■■□□□ 1
CISHQ9NSE2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.28■■□□□ 1
CISHQ9NSE2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CISHQ9NSE2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.28■■□□□ 1
CISHQ9NSE2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CISHQ9NSE2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.28■■□□□ 1
CISHQ9NSE2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CISHQ9NSE2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CISHQ9NSE2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.28■■□□□ 1
CISHQ9NSE2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CISHQ9NSE2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CISHQ9NSE2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.28■■□□□ 1
CISHQ9NSE2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.28■■□□□ 1
CISHQ9NSE2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.28■■□□□ 1
CISHQ9NSE2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CISHQ9NSE2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CISHQ9NSE2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.28■■□□□ 1
CISHQ9NSE2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.28■■□□□ 1
CISHQ9NSE2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.28■■□□□ 1
CISHQ9NSE2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CISHQ9NSE2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.28■■□□□ 1
CISHQ9NSE2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.28■■□□□ 1
CISHQ9NSE2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CISHQ9NSE2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.27■■□□□ 1
CISHQ9NSE2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.27■■□□□ 1
CISHQ9NSE2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CISHQ9NSE2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CISHQ9NSE2 UNC93B4-201ENST00000505679 747 ntBASIC21.27■■□□□ 1
CISHQ9NSE2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.27■■□□□ 1
CISHQ9NSE2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.27■■□□□ 1
CISHQ9NSE2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.27■■□□□ 1
CISHQ9NSE2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CISHQ9NSE2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CISHQ9NSE2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
CISHQ9NSE2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.27■■□□□ 1
CISHQ9NSE2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.27■■□□□ 1
CISHQ9NSE2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CISHQ9NSE2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CISHQ9NSE2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.27■□□□□ 0.99
CISHQ9NSE2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
CISHQ9NSE2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CISHQ9NSE2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.27■□□□□ 0.99
CISHQ9NSE2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CISHQ9NSE2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.26■□□□□ 0.99
CISHQ9NSE2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.26■□□□□ 0.99
CISHQ9NSE2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CISHQ9NSE2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CISHQ9NSE2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CISHQ9NSE2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CISHQ9NSE2 CD99P1-205ENST00000527459 561 ntBASIC21.26■□□□□ 0.99
CISHQ9NSE2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.26■□□□□ 0.99
CISHQ9NSE2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CISHQ9NSE2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.26■□□□□ 0.99
CISHQ9NSE2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.26■□□□□ 0.99
CISHQ9NSE2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.26■□□□□ 0.99
CISHQ9NSE2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.26■□□□□ 0.99
CISHQ9NSE2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CISHQ9NSE2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CISHQ9NSE2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CISHQ9NSE2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.25■□□□□ 0.99
CISHQ9NSE2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CISHQ9NSE2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CISHQ9NSE2 AC124283.5-201ENST00000624661 1809 ntBASIC21.25■□□□□ 0.99
CISHQ9NSE2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CISHQ9NSE2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CISHQ9NSE2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.25■□□□□ 0.99
CISHQ9NSE2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CISHQ9NSE2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.25■□□□□ 0.99
CISHQ9NSE2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.25■□□□□ 0.99
CISHQ9NSE2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms