Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 UBE2DNL-204ENST00000602536 740 ntBASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 AL591742.1-201ENST00000604433 565 ntBASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.71□□□□□ -0.22
CDC42SE2Q9NRR3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42SE2Q9NRR3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42SE2Q9NRR3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42SE2Q9NRR3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42SE2Q9NRR3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CDC42SE2Q9NRR3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.71□□□□□ -0.22
CDC42SE2Q9NRR3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.71□□□□□ -0.22
CDC42SE2Q9NRR3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CDC42SE2Q9NRR3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42SE2Q9NRR3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42SE2Q9NRR3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 Z82202.1-201ENST00000623446 1880 ntBASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 CYP21A1P-202ENST00000354927 1481 ntBASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 TNXA-203ENST00000507684 2038 ntBASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 MYCNOS-205ENST00000641950 531 ntBASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 KRT8P17-201ENST00000453110 1448 ntBASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42SE2Q9NRR3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 TERF1P5-201ENST00000477545 1207 ntBASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC42SE2Q9NRR3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42SE2Q9NRR3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC42SE2Q9NRR3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42SE2Q9NRR3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42SE2Q9NRR3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42SE2Q9NRR3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42SE2Q9NRR3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42SE2Q9NRR3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42SE2Q9NRR3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42SE2Q9NRR3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDC42SE2Q9NRR3 KRT16P6-202ENST00000425692 1426 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms