Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.22■□□□□ 0.99
TLR9Q9NR96 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.22■□□□□ 0.99
TLR9Q9NR96 SLC25A3P1-201ENST00000443844 931 ntBASIC21.22■□□□□ 0.99
TLR9Q9NR96 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TLR9Q9NR96 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TLR9Q9NR96 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TLR9Q9NR96 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TLR9Q9NR96 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.21■□□□□ 0.99
TLR9Q9NR96 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TLR9Q9NR96 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TLR9Q9NR96 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TLR9Q9NR96 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TLR9Q9NR96 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TLR9Q9NR96 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TLR9Q9NR96 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TLR9Q9NR96 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TLR9Q9NR96 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TLR9Q9NR96 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TLR9Q9NR96 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TLR9Q9NR96 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.21■□□□□ 0.99
TLR9Q9NR96 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TLR9Q9NR96 AC007375.3-201ENST00000600936 2314 ntBASIC21.21■□□□□ 0.99
TLR9Q9NR96 AC073508.3-201ENST00000619697 1419 ntBASIC21.21■□□□□ 0.99
TLR9Q9NR96 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.2■□□□□ 0.98
TLR9Q9NR96 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.2■□□□□ 0.98
TLR9Q9NR96 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.2■□□□□ 0.98
TLR9Q9NR96 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TLR9Q9NR96 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TLR9Q9NR96 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TLR9Q9NR96 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
TLR9Q9NR96 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.2■□□□□ 0.98
TLR9Q9NR96 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.2■□□□□ 0.98
TLR9Q9NR96 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TLR9Q9NR96 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TLR9Q9NR96 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TLR9Q9NR96 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
TLR9Q9NR96 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.2■□□□□ 0.98
TLR9Q9NR96 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TLR9Q9NR96 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
TLR9Q9NR96 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TLR9Q9NR96 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TLR9Q9NR96 AL024507.2-201ENST00000606070 2574 ntBASIC21.19■□□□□ 0.98
TLR9Q9NR96 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TLR9Q9NR96 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.19■□□□□ 0.98
TLR9Q9NR96 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TLR9Q9NR96 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TLR9Q9NR96 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TLR9Q9NR96 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.19■□□□□ 0.98
TLR9Q9NR96 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.19■□□□□ 0.98
TLR9Q9NR96 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TLR9Q9NR96 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TLR9Q9NR96 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TLR9Q9NR96 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TLR9Q9NR96 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TLR9Q9NR96 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TLR9Q9NR96 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.18■□□□□ 0.98
TLR9Q9NR96 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TLR9Q9NR96 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.18■□□□□ 0.98
TLR9Q9NR96 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TLR9Q9NR96 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.18■□□□□ 0.98
TLR9Q9NR96 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.18■□□□□ 0.98
TLR9Q9NR96 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TLR9Q9NR96 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TLR9Q9NR96 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.18■□□□□ 0.98
TLR9Q9NR96 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TLR9Q9NR96 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TLR9Q9NR96 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.18■□□□□ 0.98
TLR9Q9NR96 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.18■□□□□ 0.98
TLR9Q9NR96 AC121338.2-201ENST00000622535 1744 ntBASIC21.18■□□□□ 0.98
TLR9Q9NR96 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.18■□□□□ 0.98
TLR9Q9NR96 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TLR9Q9NR96 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TLR9Q9NR96 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.17■□□□□ 0.98
TLR9Q9NR96 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TLR9Q9NR96 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TLR9Q9NR96 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TLR9Q9NR96 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TLR9Q9NR96 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TLR9Q9NR96 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TLR9Q9NR96 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.17■□□□□ 0.98
TLR9Q9NR96 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.17■□□□□ 0.98
TLR9Q9NR96 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TLR9Q9NR96 AL031985.4-201ENST00000642138 673 ntBASIC21.17■□□□□ 0.98
TLR9Q9NR96 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.17■□□□□ 0.98
TLR9Q9NR96 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.17■□□□□ 0.98
TLR9Q9NR96 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TLR9Q9NR96 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms