Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDLIM7Q9NR12 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDLIM7Q9NR12 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PDLIM7Q9NR12 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.42■■□□□ 1.18
PDLIM7Q9NR12 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.42■■□□□ 1.18
PDLIM7Q9NR12 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.42■■□□□ 1.18
PDLIM7Q9NR12 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDLIM7Q9NR12 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDLIM7Q9NR12 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDLIM7Q9NR12 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PDLIM7Q9NR12 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDLIM7Q9NR12 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 AC073195.1-201ENST00000607241 877 ntBASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 AL121829.2-201ENST00000620908 328 ntBASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 CLDN5-201ENST00000403084 2357 ntBASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDLIM7Q9NR12 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 NUDT16P1-203ENST00000513809 620 ntBASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.4■■□□□ 1.18
PDLIM7Q9NR12 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.39■■□□□ 1.18
PDLIM7Q9NR12 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PDLIM7Q9NR12 LINC01568-207ENST00000641790 1380 ntBASIC22.39■■□□□ 1.18
PDLIM7Q9NR12 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PDLIM7Q9NR12 UNC93B2-201ENST00000285383 730 ntBASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 TERF1P1-201ENST00000311003 1181 ntBASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 REXO1L10P-201ENST00000615707 1290 ntBASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 PTBP1P-201ENST00000554374 1601 ntBASIC22.39■■□□□ 1.17
PDLIM7Q9NR12 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 MIR1238-201ENST00000408483 83 ntBASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 AL031963.3-201ENST00000606441 850 ntBASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 NBPF21P-201ENST00000425093 1451 ntBASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.38■■□□□ 1.17
PDLIM7Q9NR12 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDLIM7Q9NR12 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PDLIM7Q9NR12 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PDLIM7Q9NR12 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PDLIM7Q9NR12 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PDLIM7Q9NR12 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.37■■□□□ 1.17
PDLIM7Q9NR12 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDLIM7Q9NR12 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PDLIM7Q9NR12 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms