Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 TCF3P1-201ENST00000423021 1937 ntBASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PRDM9Q9NQV7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PRDM9Q9NQV7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRDM9Q9NQV7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRDM9Q9NQV7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PRDM9Q9NQV7 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.83■□□□□ 0.61
PRDM9Q9NQV7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 AC006557.6-201ENST00000623071 864 ntBASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM9Q9NQV7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 ABHD17AP1-201ENST00000358206 933 ntBASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 AC008403.3-201ENST00000598924 454 ntBASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM9Q9NQV7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 AC008687.6-201ENST00000596318 630 ntBASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.81■□□□□ 0.6
PRDM9Q9NQV7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms