Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSU72Q9NP77 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSU72Q9NP77 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.79■□□□□ 0.76
SSU72Q9NP77 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
SSU72Q9NP77 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SSU72Q9NP77 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSU72Q9NP77 KRT8P17-201ENST00000453110 1448 ntBASIC19.79■□□□□ 0.76
SSU72Q9NP77 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSU72Q9NP77 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.79■□□□□ 0.76
SSU72Q9NP77 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SSU72Q9NP77 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SSU72Q9NP77 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSU72Q9NP77 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSU72Q9NP77 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSU72Q9NP77 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.79■□□□□ 0.76
SSU72Q9NP77 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSU72Q9NP77 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.78■□□□□ 0.76
SSU72Q9NP77 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.78■□□□□ 0.76
SSU72Q9NP77 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.78■□□□□ 0.76
SSU72Q9NP77 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSU72Q9NP77 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSU72Q9NP77 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.78■□□□□ 0.76
SSU72Q9NP77 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSU72Q9NP77 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSU72Q9NP77 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.78■□□□□ 0.76
SSU72Q9NP77 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSU72Q9NP77 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSU72Q9NP77 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.78■□□□□ 0.76
SSU72Q9NP77 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.78■□□□□ 0.76
SSU72Q9NP77 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSU72Q9NP77 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSU72Q9NP77 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSU72Q9NP77 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.78■□□□□ 0.76
SSU72Q9NP77 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSU72Q9NP77 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSU72Q9NP77 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSU72Q9NP77 KRT16P6-202ENST00000425692 1426 ntBASIC19.77■□□□□ 0.76
SSU72Q9NP77 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSU72Q9NP77 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSU72Q9NP77 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSU72Q9NP77 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSU72Q9NP77 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.77■□□□□ 0.76
SSU72Q9NP77 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SSU72Q9NP77 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.77■□□□□ 0.76
SSU72Q9NP77 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.77■□□□□ 0.76
SSU72Q9NP77 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.77■□□□□ 0.76
SSU72Q9NP77 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSU72Q9NP77 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSU72Q9NP77 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSU72Q9NP77 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SSU72Q9NP77 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SSU72Q9NP77 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
SSU72Q9NP77 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SSU72Q9NP77 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SSU72Q9NP77 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 AC019069.1-201ENST00000610008 1333 ntBASIC19.76■□□□□ 0.75
SSU72Q9NP77 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 AC027612.3-201ENST00000413684 1047 ntBASIC19.76■□□□□ 0.75
SSU72Q9NP77 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 NEFHP1-201ENST00000412845 2629 ntBASIC19.76■□□□□ 0.75
SSU72Q9NP77 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.76■□□□□ 0.75
SSU72Q9NP77 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSU72Q9NP77 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSU72Q9NP77 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSU72Q9NP77 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSU72Q9NP77 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
SSU72Q9NP77 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SSU72Q9NP77 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.75■□□□□ 0.75
SSU72Q9NP77 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.75■□□□□ 0.75
SSU72Q9NP77 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.75■□□□□ 0.75
SSU72Q9NP77 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSU72Q9NP77 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSU72Q9NP77 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSU72Q9NP77 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms