Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 AC010653.2-201ENST00000623505 997 ntBASIC18.71■□□□□ 0.59
CHD8Q9HCK8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 AL139424.1-201ENST00000607572 797 ntBASIC18.7■□□□□ 0.58
CHD8Q9HCK8 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 RCC2P6-201ENST00000526625 1557 ntBASIC18.7■□□□□ 0.58
CHD8Q9HCK8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD8Q9HCK8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 BX640515.1-201ENST00000617215 977 ntBASIC18.69■□□□□ 0.58
CHD8Q9HCK8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD8Q9HCK8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 AC092865.5-201ENST00000545435 363 ntBASIC18.68■□□□□ 0.58
CHD8Q9HCK8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 HLA-A-201ENST00000376802 1334 ntBASIC18.68■□□□□ 0.58
CHD8Q9HCK8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 MIR1233-2-201ENST00000408138 82 ntBASIC18.68■□□□□ 0.58
CHD8Q9HCK8 MIR1233-1-201ENST00000408722 82 ntBASIC18.68■□□□□ 0.58
CHD8Q9HCK8 YBX1P10-201ENST00000444752 975 ntBASIC18.68■□□□□ 0.58
CHD8Q9HCK8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD8Q9HCK8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.67■□□□□ 0.58
CHD8Q9HCK8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 C1QL1P1-201ENST00000568105 661 ntBASIC18.66■□□□□ 0.58
CHD8Q9HCK8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 AF228730.7-201ENST00000641842 219 ntBASIC18.66■□□□□ 0.58
CHD8Q9HCK8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD8Q9HCK8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms