Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 GPX1P1-201ENST00000388829 606 ntBASIC19.06■□□□□ 0.64
BRF2Q9HAW0 BX276092.2-201ENST00000417668 665 ntBASIC19.06■□□□□ 0.64
BRF2Q9HAW0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 AL121832.2-201ENST00000610979 668 ntBASIC19.05■□□□□ 0.64
BRF2Q9HAW0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 PHGDH-210ENST00000641115 1638 ntBASIC19.04■□□□□ 0.64
BRF2Q9HAW0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.04■□□□□ 0.64
BRF2Q9HAW0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 AC006970.2-201ENST00000450065 779 ntBASIC19.03■□□□□ 0.64
BRF2Q9HAW0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms