Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 GPX1P1-201ENST00000388829 606 ntBASIC19.06■□□□□ 0.64
BRF2Q9HAW0 BX276092.2-201ENST00000417668 665 ntBASIC19.06■□□□□ 0.64
BRF2Q9HAW0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
BRF2Q9HAW0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 AL121832.2-201ENST00000610979 668 ntBASIC19.05■□□□□ 0.64
BRF2Q9HAW0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRF2Q9HAW0 PHGDH-210ENST00000641115 1638 ntBASIC19.04■□□□□ 0.64
BRF2Q9HAW0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.04■□□□□ 0.64
BRF2Q9HAW0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRF2Q9HAW0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 AC006970.2-201ENST00000450065 779 ntBASIC19.03■□□□□ 0.64
BRF2Q9HAW0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRF2Q9HAW0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms