Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf49Q9H741 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.69■□□□□ 0.42
C12orf49Q9H741 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.69■□□□□ 0.42
C12orf49Q9H741 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf49Q9H741 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf49Q9H741 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf49Q9H741 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
C12orf49Q9H741 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.69■□□□□ 0.42
C12orf49Q9H741 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
C12orf49Q9H741 AC073314.1-201ENST00000568729 2216 ntBASIC17.69■□□□□ 0.42
C12orf49Q9H741 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf49Q9H741 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.69■□□□□ 0.42
C12orf49Q9H741 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf49Q9H741 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf49Q9H741 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
C12orf49Q9H741 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf49Q9H741 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf49Q9H741 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
C12orf49Q9H741 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf49Q9H741 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
C12orf49Q9H741 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf49Q9H741 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf49Q9H741 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf49Q9H741 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf49Q9H741 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.68■□□□□ 0.42
C12orf49Q9H741 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.68■□□□□ 0.42
C12orf49Q9H741 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
C12orf49Q9H741 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf49Q9H741 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.68■□□□□ 0.42
C12orf49Q9H741 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 AC239809.2-201ENST00000415381 517 ntBASIC17.67■□□□□ 0.42
C12orf49Q9H741 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 AC093827.2-201ENST00000512654 315 ntBASIC17.67■□□□□ 0.42
C12orf49Q9H741 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 MTDHP1-201ENST00000605323 784 ntBASIC17.67■□□□□ 0.42
C12orf49Q9H741 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf49Q9H741 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
C12orf49Q9H741 AC020907.5-201ENST00000624372 1936 ntBASIC17.66■□□□□ 0.42
C12orf49Q9H741 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.66■□□□□ 0.42
C12orf49Q9H741 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.66■□□□□ 0.42
C12orf49Q9H741 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.66■□□□□ 0.42
C12orf49Q9H741 PRKY-204ENST00000533551 1019 ntBASIC17.66■□□□□ 0.42
C12orf49Q9H741 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.66■□□□□ 0.42
C12orf49Q9H741 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.66■□□□□ 0.42
C12orf49Q9H741 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
C12orf49Q9H741 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
C12orf49Q9H741 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf49Q9H741 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf49Q9H741 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf49Q9H741 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf49Q9H741 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf49Q9H741 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf49Q9H741 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf49Q9H741 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf49Q9H741 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf49Q9H741 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf49Q9H741 KRASP1-201ENST00000407852 552 ntBASIC17.65■□□□□ 0.42
C12orf49Q9H741 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf49Q9H741 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.65■□□□□ 0.42
C12orf49Q9H741 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
C12orf49Q9H741 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms